RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 TBC1D13Q9NVG8 400 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 RMND1Q9NWS8 449 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 KLK14Q9P0G3 267 aa13.21□□□□□ -0.29
CSNK1E-213ENST00000495232 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 UBE4BO95155 1302 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 KIF20AO95235 890 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 PRR29P0C7W0 189 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 SCNN1GP51170 649 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 DPYDQ12882 1025 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 GPM6BQ13491 265 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 LRRC55Q6ZSA7 311 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 SPRED2Q7Z698 418 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 ZNF558Q96NG5 402 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 CDX2Q99626 313 aaPredicted RBP13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 CWH43Q9H720 699 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 MTMR10Q9NXD2 777 aa13.2□□□□□ -0.3
CSNK1E-213ENST00000495232 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 C5orf67F2Z3F1 127 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 OGTO15294 1046 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 KLRC4O43908 158 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 ALDH2P05091 517 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 THP07101 528 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 CLTAP09496 248 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 IGFBP4P22692 258 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 PPM1AP35813 382 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 KRT17Q04695 432 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 EHHADHQ08426 723 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 KCNA1Q09470 495 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 GRIK3Q13003 919 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 PNOCQ13519 176 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 PTPROQ16827 1216 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 KCNT2Q6UVM3 1135 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 HS2ST1Q7LGA3 356 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 CEP120Q8N960 986 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 COLGALT1Q8NBJ5 622 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 ZNF507Q8TCN5 953 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 P2RX5Q93086 422 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 SMARCE1Q969G3 411 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 FGFBP2Q9BYJ0 223 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 AGO2Q9UKV8 859 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 TDRD15B5MCY1 1934 aaKnown RBP13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 TRANK1O15050 2925 aa13.19□□□□□ -0.3
CSNK1E-213ENST00000495232 A0A0B4J269 797 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 H3BNC9 293 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 RFXAPO00287 272 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 TULP1O00294 542 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 ABLIM1O14639 778 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 INPPL1O15357 1258 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 LDHAP00338 332 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 FOSL2P15408 326 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 AFF1P51825 1210 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 BCAR1P56945 870 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 KCNB1Q14721 858 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 SEZ6Q53EL9 994 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 ARMCX5Q6P1M9 558 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 EPM2AIP1Q7L775 607 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 NELFCDQ8IXH7 590 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 ELOA2Q8IYF1 753 aaPredicted RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 KLHL23Q8NBE8 558 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 GLIS3Q8NEA6 775 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 NOC3LQ8WTT2 800 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 MYLIPQ8WY64 445 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 GUCD1Q96NT3 240 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 GSDMAQ96QA5 445 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 TMEM175Q9BSA9 504 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 NRDE2Q9H7Z3 1164 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 MIOSQ9NXC5 875 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 SPG21Q9NZD8 308 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 PUF60Q9UHX1 559 aaKnown RBP13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 FAN1Q9Y2M0 1017 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 KIAA1671Q9BY89 1806 aa13.18□□□□□ -0.3
CSNK1E-213ENST00000495232 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 EPOPA6NHQ4 379 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 TISP43B9A030 160 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 DDHD2O94830 711 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 LINC00271P0C7V0 271 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 GARTP22102 1010 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 OR1G1P47890 313 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 SNRPFP62306 86 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 PPP2R3AQ06190 1150 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 STK4Q13043 487 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 HSP90AA2PQ14568 343 aaPredicted RBP13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 KNOP1Q1ED39 458 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 GOLGA5Q8TBA6 731 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 TMEM169Q96HH4 297 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 GTPBP4Q9BZE4 634 aaKnown RBP13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 HAPLN2Q9GZV7 340 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 PLEKHA5Q9HAU0 1116 aa13.17□□□□□ -0.3
CSNK1E-213ENST00000495232 ALG13Q9NP73 1137 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms