RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 CCDC65Q8IXS2 484 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 DNAJC19Q96DA6 116 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 IGSF21Q96ID5 467 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 ACAP3Q96P50 834 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 TCF25Q9BQ70 676 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 IGFLR1Q9H665 355 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 MAGEF1Q9HAY2 307 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 TOPORSQ9NS56 1045 aaPredicted RBP17.45■□□□□ 0.38
LIME1-209ENST00000494776 COG5Q9UP83 839 aa17.45■□□□□ 0.38
LIME1-209ENST00000494776 PRG3Q9Y2Y8 225 aaPredicted RBP17.45■□□□□ 0.38
LIME1-209ENST00000494776 TRANK1O15050 2925 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.44■□□□□ 0.38
LIME1-209ENST00000494776 NRP1O14786 923 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 B4GALT3O60512 393 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 THP07101 528 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 PROZP22891 400 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 CMA1P23946 247 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 ERVFC1P60507 584 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 ASIC1P78348 528 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 GTF2BQ00403 316 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 ZC2HC1CQ53FD0 456 aaPredicted RBP17.44■□□□□ 0.38
LIME1-209ENST00000494776 ZNF720Q7Z2F6 126 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 COLGALT2Q8IYK4 626 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 NGRNQ9NPE2 291 aaKnown RBP17.44■□□□□ 0.38
LIME1-209ENST00000494776 KBTBD4Q9NVX7 518 aa17.44■□□□□ 0.38
LIME1-209ENST00000494776 EYSQ5T1H1 3165 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 A0A1B0GVL5 298 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 NCK2O43639 380 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 GCNT3O95395 438 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 AAK1Q2M2I8 961 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 DDX53Q86TM3 631 aaKnown RBP17.43■□□□□ 0.38
LIME1-209ENST00000494776 RBM23Q86U06 439 aaKnown RBP17.43■□□□□ 0.38
LIME1-209ENST00000494776 TMEM173Q86WV6 379 aaPredicted RBP17.43■□□□□ 0.38
LIME1-209ENST00000494776 VPS52Q8N1B4 723 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 CEP120Q8N960 986 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 TMEM87AQ8NBN3 555 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 GSTCDQ8NEC7 633 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 ATXN2LQ8WWM7 1075 aaKnown RBP17.43■□□□□ 0.38
LIME1-209ENST00000494776 KCNN1Q92952 543 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 FIZ1Q96SL8 496 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 COLEC11Q9BWP8 271 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 COL25A1Q9BXS0 654 aaPredicted RBP17.43■□□□□ 0.38
LIME1-209ENST00000494776 ST6GALNAC4Q9H4F1 302 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 TLE6Q9H808 572 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 GDPD2Q9HCC8 539 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 PCDHB13Q9Y5F0 798 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 PCDHGC5Q9Y5F6 944 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 UNC80Q8N2C7 3258 aa17.43■□□□□ 0.38
LIME1-209ENST00000494776 PLXNA4Q9HCM2 1894 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 PFKFB1P16118 471 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 AFMP43652 599 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 NRIP1P48552 1158 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 MRPS5P82675 430 aaKnown RBP17.42■□□□□ 0.38
LIME1-209ENST00000494776 MCL1Q07820 350 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 DSC1Q08554 894 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 HYAL1Q12794 435 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 TUSC3Q13454 348 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 SMC1AQ14683 1233 aaKnown RBP17.42■□□□□ 0.38
LIME1-209ENST00000494776 ADGRD2Q7Z7M1 963 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 MAP4K3Q8IVH8 894 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 HVCN1Q96D96 273 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 TRIM9Q9C026 710 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 OLFML3Q9NRN5 406 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 CLDND1Q9NY35 253 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 STK39Q9UEW8 545 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 SERTAD1Q9UHV2 236 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 EXOC7Q9UPT5 735 aa17.42■□□□□ 0.38
LIME1-209ENST00000494776 FRMD3A2A2Y4 597 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 GOLGA6L4A6NEF3 574 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 CASTOR2A6NHX0 329 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 ABLIM1O14639 778 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 PTGESO14684 152 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 FSCN2O14926 492 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 CXCL14O95715 111 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 PIGRP01833 764 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 TFF2Q03403 129 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 COASYQ13057 564 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 ALCAMQ13740 583 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 SEZ6Q53EL9 994 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 TJAP1Q5JTD0 557 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 GLRA4Q5JXX5 417 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 STXBP4Q6ZWJ1 553 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 SYCP3Q8IZU3 236 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 FSIP1Q8NA03 581 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 BCL7CQ8WUZ0 217 aaPredicted RBP17.41■□□□□ 0.38
LIME1-209ENST00000494776 PABPC5Q96DU9 382 aaKnown RBP17.41■□□□□ 0.38
LIME1-209ENST00000494776 ACCSQ96QU6 501 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 C7orf25Q9BPX7 421 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 MSTO1Q9BUK6 570 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 BLZF1Q9H2G9 400 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 UBE2ZQ9H832 354 aaPredicted RBP17.41■□□□□ 0.38
LIME1-209ENST00000494776 USP25Q9UHP3 1055 aa17.41■□□□□ 0.38
LIME1-209ENST00000494776 PER2O15055 1255 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 TADA2AO75478 443 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 SLFN14P0C7P3 912 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 MYBP10242 640 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 KCNA5P22460 613 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 GTF2F1P35269 517 aaKnown RBP eCLIP17.4■□□□□ 0.38
LIME1-209ENST00000494776 SYKP43405 635 aa17.4■□□□□ 0.38
LIME1-209ENST00000494776 KYAT1Q16773 422 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms