RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 FAM213AQ9BRX8 229 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 SEMA6BQ9H3T3 888 aa15.87■□□□□ 0.13
BRCA1-223ENST00000494123 TOPORSQ9NS56 1045 aaPredicted RBP15.87■□□□□ 0.13
BRCA1-223ENST00000494123 GOLGA8IPA6NC78 632 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 GOLGA8JA6NMD2 632 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 MEIS3P2A8K0S8 358 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TULP1O00294 542 aaPredicted RBP15.86■□□□□ 0.13
BRCA1-223ENST00000494123 EXTL3O43909 919 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 EXOC3O60645 756 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 RECQL4O94761 1208 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 GJB5O95377 273 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 RPL13P26373 211 aaKnown RBP15.86■□□□□ 0.13
BRCA1-223ENST00000494123 ACOT2P49753 483 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 LRRC63Q05C16 580 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 C12orf56Q8IXR9 622 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TMEM192Q8IY95 271 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 XXYLT1Q8NBI6 393 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 HELQQ8TDG4 1101 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 KIAA1586Q9HCI6 787 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 INPP5FQ9Y2H2 1132 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 GIT1Q9Y2X7 761 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 CITO14578 2027 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TRIM49BA6NDI0 452 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TLL1O43897 1013 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 DGKIO75912 1065 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 CCDC192P0DO97 292 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 NR2F2P24468 414 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 MLH1P40692 756 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TNFSF9P41273 254 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 STX17P56962 302 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 TYRO3Q06418 890 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 EDRF1Q3B7T1 1238 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 ZSCAN23Q3MJ62 389 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 ZCWPW2Q504Y3 356 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 ZBTB41Q5SVQ8 909 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 ANKRD40Q6AI12 368 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 CRIPAKQ8N1N5 446 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 URGCPQ8TCY9 931 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 RPS6KC1Q96S38 1066 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 RPF1Q9H9Y2 349 aaKnown RBP15.86■□□□□ 0.13
BRCA1-223ENST00000494123 KLK14Q9P0G3 267 aa15.86■□□□□ 0.13
BRCA1-223ENST00000494123 CPSF3Q9UKF6 684 aaKnown RBP15.86■□□□□ 0.13
BRCA1-223ENST00000494123 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-223ENST00000494123 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-223ENST00000494123 TBKBP1A7MCY6 615 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 FAM189A1O60320 539 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 CXCL8P10145 99 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 PPP2R3AQ06190 1150 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 ADAM9Q13443 819 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 MYBPC2Q14324 1141 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 PAN2Q504Q3 1202 aaKnown RBP15.85■□□□□ 0.13
BRCA1-223ENST00000494123 CLLU1OSQ5K130 101 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 SLC9A9Q8IVB4 645 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 RSPH1Q8WYR4 309 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 FAM212AQ96EL1 285 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 GAD1Q99259 594 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 TMEM117Q9H0C3 514 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 RWDD2AQ9UIY3 292 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 COLQQ9Y215 455 aaPredicted RBP15.85■□□□□ 0.13
BRCA1-223ENST00000494123 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 INSL6Q9Y581 213 aa15.85■□□□□ 0.13
BRCA1-223ENST00000494123 A0A1W2PPC1 479 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 ARL5CA6NH57 179 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 ZNF233A6NK53 670 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 GRXCR1A8MXD5 290 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 CETN3O15182 167 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 OFD1O75665 1012 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 GATMP50440 423 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 PMS1P54277 932 aaKnown RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 FKBP3Q00688 224 aaKnown RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 SNRNP35Q16560 246 aaKnown RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 NFIL3Q16649 462 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 NOMO2Q5JPE7 1267 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 CT47A1Q5JQC4 288 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 CEP135Q66GS9 1140 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 RDH13Q8NBN7 331 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 ZSWIM2Q8NEG5 633 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 SNX27Q96L92 541 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 ZFP42Q96MM3 310 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 RAD9AQ99638 391 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 MRPL9Q9BYD2 267 aaKnown RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 GZF1Q9H116 711 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 RNF19AQ9NV58 838 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 RBAKQ9NYW8 714 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 RALGAPA2Q2PPJ7 1873 aa15.84■□□□□ 0.13
BRCA1-223ENST00000494123 FNDC1Q4ZHG4 1894 aaPredicted RBP15.84■□□□□ 0.13
BRCA1-223ENST00000494123 ERCC5P28715 1186 aaPredicted RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 RABGGTBP53611 331 aa15.83■□□□□ 0.13
BRCA1-223ENST00000494123 RNASELQ05823 741 aaKnown RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 BTG3Q14201 252 aaPredicted RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 ENOX2Q16206 610 aaKnown RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 TPD52L1Q16890 204 aaPredicted RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 FAM109BQ6ICB4 259 aaPredicted RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 CRELD2Q6UXH1 353 aaPredicted RBP15.83■□□□□ 0.13
BRCA1-223ENST00000494123 CBWD2Q8IUF1 395 aa15.83■□□□□ 0.13
BRCA1-223ENST00000494123 TMEM174Q8WUU8 243 aa15.83■□□□□ 0.13
BRCA1-223ENST00000494123 PLEKHA5Q9HAU0 1116 aa15.83■□□□□ 0.13
BRCA1-223ENST00000494123 DMAC2Q9NW81 257 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms