RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PIP4K2CQ8TBX8 421 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 ALKBH8Q96BT7 664 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 ABCF3Q9NUQ8 709 aa20.28■□□□□ 0.84
COL27A1-207ENST00000494090 AGO2Q9UKV8 859 aaKnown RBP20.28■□□□□ 0.84
COL27A1-207ENST00000494090 PSMD14O00487 310 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 HSPA9P38646 679 aaKnown RBP20.27■□□□□ 0.84
COL27A1-207ENST00000494090 BCAR1P56945 870 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 NCAPHQ15003 741 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 STILQ15468 1287 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 ATL2Q8NHH9 583 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 ULK4Q96C45 1275 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 MAP3K20Q9NYL2 800 aaKnown RBP20.27■□□□□ 0.84
COL27A1-207ENST00000494090 RALAP11233 206 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 ECT2Q9H8V3 914 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 APEX2Q9UBZ4 518 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 NOP14P78316 857 aaKnown RBP20.27■□□□□ 0.84
COL27A1-207ENST00000494090 LPAR1Q92633 364 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 CRAMP1Q96RY5 1269 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 SP110Q9HB58 689 aa20.27■□□□□ 0.84
COL27A1-207ENST00000494090 H0Y3Z8 333 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 PPP1R37O75864 691 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 CSPG5O95196 566 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 AGTP01019 485 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 RFX5P48382 616 aaPredicted RBP20.27■□□□□ 0.83
COL27A1-207ENST00000494090 STK4Q13043 487 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 EDRF1Q3B7T1 1238 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 RNF217Q8TC41 542 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 TEX12Q9BXU0 123 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 VPS11Q9H270 941 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 CEP152O94986 1710 aa20.27■□□□□ 0.83
COL27A1-207ENST00000494090 A8MXQ7 604 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 MDH1P40925 334 aaKnown RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 GUCY1A3Q02108 690 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 ENGASEQ8NFI3 743 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 OTUD5Q96G74 571 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 MAP3K14Q99558 947 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 AP3B1O00203 1094 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 CYP26A1O43174 497 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 DDX5P17844 614 aaKnown RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 LDHDQ86WU2 507 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 IL25Q9H293 177 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 EPB41L4AQ9HCS5 686 aaPredicted RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 SENP1Q9P0U3 644 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 UVRAGQ9P2Y5 699 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 EEF1B2P24534 225 aaKnown RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 NUDT18Q6ZVK8 323 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 PARP9Q8IXQ6 854 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 CXorf38Q8TB03 319 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 AFG1LQ8WV93 481 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 XAB2Q9HCS7 855 aaKnown RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 KCNH4Q9UQ05 1017 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 L3MBTL1Q9Y468 752 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 STXBP3O00186 592 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 TRAPPC3O43617 180 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 UCHL3P15374 230 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 SCP2P22307 547 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 LRRC14Q15048 493 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 SLC35G2Q8TBE7 412 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 TRIM54Q9BYV2 358 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 EPN3Q9H201 632 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 FAM217BQ9NTX9 383 aaPredicted RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 RGL1Q9NZL6 768 aa20.26■□□□□ 0.83
COL27A1-207ENST00000494090 SETD1BQ9UPS6 1966 aaKnown RBP20.26■□□□□ 0.83
COL27A1-207ENST00000494090 FLT1P17948 1338 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 PTPRMP28827 1452 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 MYMKA6NI61 221 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 ESRRBO95718 433 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 ZC3H18Q86VM9 953 aaKnown RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 GTF3C2Q8WUA4 911 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 DCTN4Q9UJW0 460 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 CREB3O43889 395 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 YWHABP31946 246 aaKnown RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 MS4A14Q96JA4 679 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 ETNK1Q9HBU6 452 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 KCND2Q9NZV8 630 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 NSUN2Q08J23 767 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 IMPG1Q17R60 797 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 USP49Q70CQ1 688 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 RPAP3Q9H6T3 665 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 SUDS3Q9H7L9 328 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 GYPCP04921 128 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 GALCP54803 685 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 NAB2Q15742 525 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 C1orf146Q5VVC0 180 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 HIPK4Q8NE63 616 aa20.25■□□□□ 0.83
COL27A1-207ENST00000494090 JPH1Q9HDC5 661 aaPredicted RBP20.25■□□□□ 0.83
COL27A1-207ENST00000494090 C19orf81C9J6K1 198 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 PHF2O75151 1096 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 CYP2C19P33261 490 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 ANGPTL8Q6UXH0 198 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 ASIC4Q96FT7 647 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 MOSPD1Q9UJG1 213 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 FMO5P49326 533 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 CDK17Q00537 523 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 BTBD8Q5XKL5 378 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 PDCD6IPQ8WUM4 868 aaKnown RBP20.24■□□□□ 0.83
COL27A1-207ENST00000494090 E5RI56 91 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 NFIXQ14938 502 aa20.24■□□□□ 0.83
COL27A1-207ENST00000494090 TRIML2Q8N7C3 387 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms