RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 EPN1Q9Y6I3 576 aaPredicted RBP11.59□□□□□ -0.55
PDLIM1-205ENST00000493949 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 EIF3CLB5ME19 914 aaKnown RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 GOLGA8KD6RF30 607 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 LGALS2P05162 132 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 NR3C2P08235 984 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 ARP10275 920 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 TGFB3P10600 412 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 SP100P23497 879 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 TECP42680 631 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 ERVFC1P60507 584 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 VSNL1P62760 191 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 ORC2Q13416 577 aaPredicted RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 KRT31Q15323 416 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 E2F4Q16254 413 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 GALNT17Q6IS24 598 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 NPAS4Q8IUM7 802 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 C1orf131Q8NDD1 294 aaKnown RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 CYP2W1Q8TAV3 490 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 GPKOWQ92917 476 aaPredicted RBP eCLIP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 EIF3CQ99613 913 aaKnown RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 CRACR2AQ9BSW2 395 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 POMKQ9H5K3 350 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 SH3GLB2Q9NR46 395 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 TOMM22Q9NS69 142 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 RNF14Q9UBS8 474 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 FAN1Q9Y2M0 1017 aa11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 LUC7L2Q9Y383 392 aaKnown RBP11.58□□□□□ -0.56
PDLIM1-205ENST00000493949 BICDL2A1A5D9 508 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 KCNJ18B7U540 433 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 TEX33O43247 280 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 OPA1O60313 960 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 PRPF6O94906 941 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 GGPS1O95749 300 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 FGRP09769 529 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 SNHG28P0DPA3 235 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 EPB41P11171 864 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 EIF2AK2P19525 551 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 KRT9P35527 623 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 ZNF543Q08ER8 600 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 PPFIA1Q13136 1202 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 KCNJ12Q14500 433 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 SEC23AQ15436 765 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 GLE1Q53GS7 698 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 FBXO47Q5MNV8 452 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 TTC38Q5R3I4 469 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 ARHGEF16Q5VV41 709 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 KIAA0319Q5VV43 1072 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 TSHZ1Q6ZSZ6 1077 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 CATIPQ7Z7H3 387 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 RTN4RL1Q86UN2 441 aaPredicted RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 MMGT1Q8N4V1 131 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 FLCNQ8NFG4 579 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 MICAL1Q8TDZ2 1067 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 TNFRSF25Q93038 417 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 ADAM7Q9H2U9 754 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 PXMP2Q9NR77 195 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 SETD4Q9NVD3 440 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 PUF60Q9UHX1 559 aaKnown RBP11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 USTQ9Y2C2 406 aa11.57□□□□□ -0.56
PDLIM1-205ENST00000493949 ZZEF1O43149 2961 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 PSMA7O14818 248 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ORC4O43929 436 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 RNF40O75150 1001 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ASGR2P07307 311 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 STAG3L1P0CL83 205 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ATXN1P54253 815 aaKnown RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 SP2Q02086 613 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 GHRHRQ02643 423 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 GOLGA8FQ08AF8 430 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 GOLGA8DPQ0D2H9 430 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 MTF1Q14872 753 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 CCDC178Q5BJE1 867 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ALS2CLQ60I27 953 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ICE2Q659A1 982 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 WWC2Q6AWC2 1192 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 TAF2Q6P1X5 1199 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 PDXDC2PQ6P474 469 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 EMBQ6PCB8 327 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ZC3H14Q6PJT7 736 aaKnown RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 MCF2L2Q86YR7 1114 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 EIF1ADQ8N9N8 165 aaKnown RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 TRIM58Q8NG06 486 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 DHTKD1Q96HY7 919 aaPredicted RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 ZKSCAN3Q9BRR0 538 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 FTHL17Q9BXU8 183 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 EDEM3Q9BZQ6 932 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 FAM204AQ9H8W3 233 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 MAGEC2Q9UBF1 373 aaPredicted RBP11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 RSPH14Q9UHP6 348 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 HPCAL4Q9UM19 191 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 CTNND2Q9UQB3 1225 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 LZTS1Q9Y250 596 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 TELO2Q9Y4R8 837 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 PCDHB12Q9Y5F1 795 aa11.56□□□□□ -0.56
PDLIM1-205ENST00000493949 SQORQ9Y6N5 450 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms