RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 GRM5P41594 1212 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 BTG3Q14201 252 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 SLFN12LQ6IEE8 588 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 CAVIN1Q6NZI2 390 aaKnown RBP19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 ARMCX5Q6P1M9 558 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 HACE1Q8IYU2 909 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 LRCH3Q96II8 777 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 RNF216Q9NWF9 866 aaPredicted RBP19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 MIOSQ9NXC5 875 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 PCDHA11Q9Y5I1 949 aa19.52■□□□□ 0.71
PDLIM7-208ENST00000493815 TULP1O00294 542 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 OGTO15294 1046 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 POMCP01189 267 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 CD44P16070 742 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 SMAD3P84022 425 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 HABP4Q5JVS0 413 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 LRRC55Q6ZSA7 311 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 GUF1Q8N442 669 aaKnown RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 FAM213AQ9BRX8 229 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 CCDC94Q9BW85 323 aaPredicted RBP19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 TMEM117Q9H0C3 514 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 MSRAQ9UJ68 235 aa19.51■□□□□ 0.71
PDLIM7-208ENST00000493815 HOXA2O43364 376 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 CXCL8P10145 99 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 SCNN1GP51170 649 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 CYP2J2P51589 502 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 NOMO2Q5JPE7 1267 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 HS2ST1Q7LGA3 356 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 GSTCDQ8NEC7 633 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 ACAP3Q96P50 834 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 SEMA6BQ9H3T3 888 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 TYW1Q9NV66 732 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 PLAGL2Q9UPG8 496 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 GIT1Q9Y2X7 761 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 MRPL42Q9Y6G3 142 aaKnown RBP19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 GBF1Q92538 1859 aa19.5■□□□□ 0.71
PDLIM7-208ENST00000493815 GARTP22102 1010 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 NFKBIBQ15653 356 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 RAB30Q15771 203 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 GLRA4Q5JXX5 417 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 CCDC183Q5T5S1 534 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 KLHL10Q6JEL2 608 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 CRELD2Q6UXH1 353 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 ADSSL1Q8N142 457 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 UBN1Q9NPG3 1134 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 TBC1D13Q9NVG8 400 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 HSPBP1Q9NZL4 362 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 MTUS1Q9ULD2 1270 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 LINC01553A4QN01 128 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 KIF20AO95235 890 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 CLTAP09496 248 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 YARSP54577 528 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 SPAG1Q07617 926 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 ENOX2Q16206 610 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 SLC10A6Q3KNW5 377 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 ZNF280BQ86YH2 543 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 CMTR2Q8IYT2 770 aaKnown RBP19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 SP7Q8TDD2 431 aaPredicted RBP19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 TIFAQ96CG3 184 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 FAM212AQ96EL1 285 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 EEF2KMTQ96G04 330 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 CERS4Q9HA82 394 aa19.49■□□□□ 0.71
PDLIM7-208ENST00000493815 PPP1R3GB7ZBB8 358 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 PTGESO14684 152 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 B4GALT3O60512 393 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 PBX3P40426 434 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 PMS1P54277 932 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 KLHL40Q2TBA0 621 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 FIBCD1Q8N539 461 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 RDH13Q8NBN7 331 aa19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 CPSF3Q9UKF6 684 aaKnown RBP19.48■□□□□ 0.71
PDLIM7-208ENST00000493815 TRIM49BA6NDI0 452 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 PDXKO00764 312 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 TAP1Q03518 808 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 RNASELQ05823 741 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 SPOUT1Q5T280 376 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 PPP2R2DQ66LE6 453 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 RBM43Q6ZSC3 357 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 CBWD2Q8IUF1 395 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 TRIML1Q8N9V2 468 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 URGCPQ8TCY9 931 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 SNX27Q96L92 541 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 RPS6KC1Q96S38 1066 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 RPF1Q9H9Y2 349 aaKnown RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 SLC28A3Q9HAS3 691 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 TOPORSQ9NS56 1045 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 CACNG4Q9UBN1 327 aa19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 FNDC1Q4ZHG4 1894 aaPredicted RBP19.47■□□□□ 0.71
PDLIM7-208ENST00000493815 EXTL3O43909 919 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 DDHD2O94830 711 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 NR3C1P04150 777 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 LINC00271P0C7V0 271 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 WNT7BP56706 349 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 DPCR1Q3MIW9 517 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 ZCWPW2Q504Y3 356 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 COBLL1Q53SF7 1204 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 ALKAL1Q6UXT8 129 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 LRRC43Q8N309 656 aa19.46■□□□□ 0.71
PDLIM7-208ENST00000493815 GPD1LQ8N335 351 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms