RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 XXYLT1Q8NBI6 393 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 SMG8Q8ND04 991 aaKnown RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 LPPQ93052 612 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TOP1MTQ969P6 601 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 SAAL1Q96ER3 474 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 FAM193BQ96PV7 902 aaPredicted RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 CBWD1Q9BRT8 395 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 ANP32EQ9BTT0 268 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 MRPL9Q9BYD2 267 aaKnown RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TMEM117Q9H0C3 514 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 KCTD10Q9H3F6 313 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 SNTG2Q9NY99 539 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 RBAKQ9NYW8 714 aaPredicted RBP8.28□□□□□ -1.08
VEGFA-214ENST00000493786 HSPBP1Q9NZL4 362 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 KANSL3Q9P2N6 904 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 TRAF3IP3Q9Y228 551 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 INPP5FQ9Y2H2 1132 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 HES2Q9Y543 173 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 INSL6Q9Y581 213 aa8.28□□□□□ -1.08
VEGFA-214ENST00000493786 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 A0A1W2PPC1 479 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 GOLGA8IPA6NC78 632 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ARL5CA6NH57 179 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF233A6NK53 670 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 GOLGA8JA6NMD2 632 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 PPP1R3GB7ZBB8 358 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ABLIM1O14639 778 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 TGFB1I1O43294 461 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 XPOTO43592 962 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 RECQL4O94761 1208 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 IL18RAPO95256 599 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 GJB5O95377 273 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CXCL8P10145 99 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 EPB41P11171 864 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 FGFR1P11362 822 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 KRT13P13646 458 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CD44P16070 742 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ATF7P17544 494 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 BMP6P22004 513 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ERCC5P28715 1186 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ADSSP30520 456 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 HOXD13P35453 343 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 MLH1P40692 756 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ACOT2P49753 483 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 STX17P56962 302 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 FKBP3Q00688 224 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 POU5F1Q01860 360 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ADAM9Q13443 819 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 BTG3Q14201 252 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SURF1Q15526 300 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 RAB30Q15771 203 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SNRNP35Q16560 246 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 NFIL3Q16649 462 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 DPCR1Q3MIW9 517 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 PAN2Q504Q3 1202 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 NOMO2Q5JPE7 1267 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SPOUT1Q5T280 376 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 RASIP1Q5U651 963 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CENPPQ6IPU0 288 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 ZNF598Q86UK7 904 aaKnown RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SLC9A9Q8IVB4 645 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CD302Q8IX05 232 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 LRRC43Q8N309 656 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CSGALNACT2Q8N6G5 542 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 CEP120Q8N960 986 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 FNBP1Q96RU3 617 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 RAD9AQ99638 391 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 GZF1Q9H116 711 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 IKZF4Q9H2S9 585 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SEMA6BQ9H3T3 888 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 SLC38A7Q9NVC3 462 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 KLK14Q9P0G3 267 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 RWDD2AQ9UIY3 292 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 MSRAQ9UJ68 235 aa8.27□□□□□ -1.09
VEGFA-214ENST00000493786 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.27□□□□□ -1.09
VEGFA-214ENST00000493786 PDE4DIPQ5VU43 2346 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 CEP290O15078 2479 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 TET1Q8NFU7 2136 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 CARNS1A5YM72 827 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 TRIM49BA6NDI0 452 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 SLC16A3O15427 465 aaKnown RBP8.26□□□□□ -1.09
VEGFA-214ENST00000493786 DGKIO75912 1065 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 PSMC2P35998 433 aaKnown RBP8.26□□□□□ -1.09
VEGFA-214ENST00000493786 TNFSF9P41273 254 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 GRIK3Q13003 919 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 CCDC40Q4G0X9 1142 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 ZCWPW2Q504Y3 356 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 CLLU1OSQ5K130 101 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 ANKRD40Q6AI12 368 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 FOXR2Q6PJQ5 311 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 AGMOQ6ZNB7 445 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 TMCO2Q7Z6W1 182 aaPredicted RBP8.26□□□□□ -1.09
VEGFA-214ENST00000493786 FAM114A1Q8IWE2 563 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 BRSK2Q8IWQ3 736 aa8.26□□□□□ -1.09
VEGFA-214ENST00000493786 FAM186BQ8IYM0 893 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms