RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 TRPM5Q9NZQ8 1165 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 YEATS2Q9ULM3 1422 aa4.59□□□□□ -1.67
PTCD3-218ENST00000493430 STRCQ7RTU9 1775 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 PREX1Q8TCU6 1659 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 CENPVL1A0A0U1RR11 272 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 GAGE12BA1L429 117 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 FAM83GA6ND36 823 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 GAGE12HA6NDE8 117 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 PCBP1Q15365 356 aaKnown RBP eCLIP4.58□□□□□ -1.68
PTCD3-218ENST00000493430 HECTD2Q5U5R9 776 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 FRMD7Q6ZUT3 714 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 C16orf86Q6ZW13 317 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 GDF7Q7Z4P5 450 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 XYLT1Q86Y38 959 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 GLB1L2Q8IW92 636 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 PPM1KQ8N3J5 372 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 LILRA3Q8N6C8 439 aaPredicted RBP4.58□□□□□ -1.68
PTCD3-218ENST00000493430 SPON1Q9HCB6 807 aa4.58□□□□□ -1.68
PTCD3-218ENST00000493430 ABCC1P33527 1531 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ARHGAP5Q13017 1502 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ZMYM4Q5VZL5 1548 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ZFYVE16Q7Z3T8 1539 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 SYCP2Q9BX26 1530 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 EEA1Q15075 1411 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 TMEM200CA6NKL6 621 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ZAR1LA6NP61 321 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 DIRC3C9JPN6 131 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 RAB11FIP3O75154 756 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 LTA4HP09960 611 aaKnown RBP4.57□□□□□ -1.68
PTCD3-218ENST00000493430 CLEC2LP0C7M8 214 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ZEB1P37275 1124 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-218ENST00000493430 USP14P54578 494 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 FAM189BP81408 668 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 APBA1Q02410 837 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 PPARAQ07869 468 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 TERF2Q15554 542 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 DRICH1Q6PGQ1 229 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-218ENST00000493430 GPRIN1Q7Z2K8 1008 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 C11orf74Q86VG3 221 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 BEND2Q8NDZ0 799 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 APPBP2Q92624 585 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 CDC5LQ99459 802 aaKnown RBP4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ANO3Q9BYT9 981 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 SERHL2Q9H4I8 314 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 AKIP1Q9NQ31 210 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 SPTLC3Q9NUV7 552 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 PRSS50Q9UI38 385 aa4.57□□□□□ -1.68
PTCD3-218ENST00000493430 INO80Q9ULG1 1556 aaPredicted RBP4.57□□□□□ -1.68
PTCD3-218ENST00000493430 ARHGEF12Q9NZN5 1544 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 FANCAO15360 1455 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 LCHNA4D1U4 455 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 LEFTY2O00292 366 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 LPXNO60711 386 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 NCR1O76036 304 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 NDUFA10O95299 355 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 MGAT1P26572 445 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 LSSP48449 732 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 IL2P60568 153 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 MEF2AQ02078 507 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-218ENST00000493430 NHLH2Q02577 135 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 C19orf54Q5BKX5 351 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 OLFML1Q6UWY5 402 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 ARHGEF19Q8IW93 802 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 NIM1KQ8IY84 436 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 LCORLQ8N3X6 602 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 SUPT20HQ8NEM7 779 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 OR2W6PQ8NHA6 318 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 OR14C36Q8NHC7 312 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 VOPP1Q96AW1 172 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 DRC1Q96MC2 740 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 WDR11Q9BZH6 1224 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 ANKFY1Q9P2R3 1169 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 EVLQ9UI08 416 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-218ENST00000493430 TMPRSS11EQ9UL52 423 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 CHST2Q9Y4C5 530 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 ZNF142P52746 1687 aaPredicted RBP4.56□□□□□ -1.68
PTCD3-218ENST00000493430 ARAP3Q8WWN8 1544 aa4.56□□□□□ -1.68
PTCD3-218ENST00000493430 POLR1AO95602 1720 aaPredicted RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 B5MCH6 92 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 PRAMEF4O60810 478 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 FBLP22087 321 aaKnown RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 BMPR1AP36894 532 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 MANFP55145 182 aaKnown RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 RNASE9P60153 205 aaKnown RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 CCDC142Q17RM4 750 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 TKFCQ3LXA3 575 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 STRIP1Q5VSL9 837 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 EFCAB12Q6NXP0 572 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 Q6YL49 198 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 PLXDC1Q8IUK5 500 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 LYSMD2Q8IV50 215 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 DHX37Q8IY37 1157 aaKnown RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 OR10H5Q8NGA6 315 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 UBXN4Q92575 508 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 TARS2Q9BW92 718 aaKnown RBP4.55□□□□□ -1.68
PTCD3-218ENST00000493430 MS4A5Q9H3V2 200 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 FANCLQ9NW38 375 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 POGKQ9P215 609 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 PTGFRNQ9P2B2 879 aa4.55□□□□□ -1.68
PTCD3-218ENST00000493430 PPP2R3BQ9Y5P8 575 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms