RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 WDR81Q562E7 1941 aa17.31■□□□□ 0.36
SEMA4D-220ENST00000492386 TLDC2A0PJX2 215 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 GRIN3BO60391 1043 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CHN1P15882 459 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 FAM102BQ5T8I3 360 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 TRMT1LQ7Z2T5 733 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CCDC105Q8IYK2 499 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 ATXN2LQ8WWM7 1075 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 PSPC1Q8WXF1 523 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 ZNF317Q96PQ6 595 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 KIFC3Q9BVG8 833 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 ZNF341Q9BYN7 854 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 TMEM8AQ9HCN3 771 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 COL4A5P29400 1685 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CTNND1O60716 968 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 ATP9AO75110 1047 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CCNE2O96020 404 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 ASNSP08243 561 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 EIF2AK2P19525 551 aaKnown RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 FGFR4P22455 802 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CNGA1P29973 690 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 KCNJ1P48048 391 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 PSMC5P62195 406 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 XKR9Q5GH70 373 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 GKAP1Q5VSY0 366 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CHADLQ6NUI6 762 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 NSMFQ6X4W1 530 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CPLX4Q7Z7G2 160 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 MAP4K3Q8IVH8 894 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 CPXCR1Q8N123 301 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 OGFOD1Q8N543 542 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 SLC17A8Q8NDX2 589 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 TAS1R2Q8TE23 839 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 RUNDC3BQ96NL0 473 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 TAAR1Q96RJ0 339 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 TOPORSQ9NS56 1045 aaPredicted RBP17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 PTPN22Q9Y2R2 807 aa17.3■□□□□ 0.36
SEMA4D-220ENST00000492386 SMIM23A6NLE4 172 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 RGS16O15492 202 aaPredicted RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 RIPK2O43353 540 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 RARGP13631 454 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 NPTX2P47972 431 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 PDE6CP51160 858 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 RWDD2BP57060 319 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 ADCY2Q08462 1091 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 SLMAPQ14BN4 828 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 PGM5Q15124 567 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 C6orf118Q5T5N4 469 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 CYFIP1Q7L576 1253 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 EPS8L3Q8TE67 593 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 DHX38Q92620 1227 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 ACTR5Q9H9F9 607 aaPredicted RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 HOMER2Q9NSB8 354 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 EXOC7Q9UPT5 735 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 PASKQ96RG2 1323 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 DNM1LO00429 736 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 AGTP01019 485 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 GTF2A1P52655 376 aaPredicted RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 SMTNP53814 917 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 MAP3K10Q02779 954 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 ANKRD20A8PQ5CZ79 823 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 TNFAIP8L3Q5GJ75 292 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 SLC39A4Q6P5W5 647 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 FAM83AQ86UY5 434 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 ELMO3Q96BJ8 720 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 NT5C1BQ96P26 610 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 SELENOSQ9BQE4 189 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 LRRC19Q9H756 370 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 RAVER2Q9HCJ3 691 aaKnown RBP17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 ANKEF1Q9NU02 776 aa17.29■□□□□ 0.36
SEMA4D-220ENST00000492386 TP73O15350 636 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 ZNF568Q3ZCX4 644 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 ACAD10Q6JQN1 1059 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 RNF207Q6ZRF8 634 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 CROCCP2Q86T23 111 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 FBXL13Q8NEE6 735 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 UHMK1Q8TAS1 419 aaKnown RBP17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 MFSD14AQ96MC6 490 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 FBXL18Q96ME1 805 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 FER1L6Q2WGJ9 1857 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 DENND3A2RUS2 1198 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 TULP1O00294 542 aaPredicted RBP17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 FSCN2O14926 492 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 RASSF9O75901 435 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 JAK3P52333 1124 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 ANO5Q75V66 913 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 BSNDQ8WZ55 320 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 SLCO2A1Q92959 643 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 HVCN1Q96D96 273 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 CEP89Q96ST8 783 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 TAOK3Q9H2K8 898 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 SLC38A10Q9HBR0 1119 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 RAB20Q9NX57 234 aa17.28■□□□□ 0.36
SEMA4D-220ENST00000492386 GOLGA6L7A0A1B0GV03 622 aa17.27■□□□□ 0.36
SEMA4D-220ENST00000492386 WDR64B1ANS9 1081 aa17.27■□□□□ 0.36
SEMA4D-220ENST00000492386 WDR46O15213 610 aaKnown RBP17.27■□□□□ 0.36
SEMA4D-220ENST00000492386 CLDN3O15551 220 aa17.27■□□□□ 0.36
SEMA4D-220ENST00000492386 ECEL1O95672 775 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms