RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 RFPL1O75677 317 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 PRPF6O94906 941 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 APOL3O95236 402 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 TYRP1P17643 537 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 ADCY8P40145 1251 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 PIK3CAP42336 1068 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 MANFP55145 182 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 ERVK-21P61565 698 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 ADCY2Q08462 1091 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 FAPQ12884 760 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 CHAF1AQ13111 956 aaPredicted RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 MTMR1Q13613 665 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 DCTN1Q14203 1278 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 WDR72Q3MJ13 1102 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 CXorf57Q6NSI4 855 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 TOGARAM2Q6ZUX3 1019 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 ESPNLQ6ZVH7 1005 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 CXXC5Q7LFL8 322 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 CARFQ8N187 725 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 CLASRPQ8N2M8 674 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 LINC01356Q8N9X3 169 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 OR5AN1Q8NGI8 311 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 ATXN2LQ8WWM7 1075 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 HOOK2Q96ED9 719 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 CCDC34Q96HJ3 373 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 AHCYL2Q96HN2 611 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 ZNF496Q96IT1 587 aaPredicted RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 TBATAQ96M53 351 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 TRIM8Q9BZR9 551 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 PNNQ9H307 717 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 PARD6AQ9NPB6 346 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 C14orf119Q9NWQ9 140 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 IPPQ9Y573 584 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 MORC2Q9Y6X9 1032 aaPredicted RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 EPRSP07814 1512 aaKnown RBP5.48□□□□□ -1.53
RTN4-215ENST00000491592 MAGI3Q5TCQ9 1506 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 TOPBP1Q92547 1522 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 MAPK8IP3Q9UPT6 1336 aa5.48□□□□□ -1.53
RTN4-215ENST00000491592 ADGRL2O95490 1459 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 POLA1P09884 1462 aaPredicted RBP5.47□□□□□ -1.53
RTN4-215ENST00000491592 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
RTN4-215ENST00000491592 KLHL18O94889 574 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 PSMA3P25788 255 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TDO2P48775 406 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 ZNF131P52739 623 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 CD83Q01151 205 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 ITKQ08881 620 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 MAP3K12Q12852 859 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 VMACQ2NL98 169 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TMEM200BQ69YZ2 307 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 RSRC2Q7L4I2 434 aaKnown RBP5.47□□□□□ -1.53
RTN4-215ENST00000491592 OTOP2Q7RTS6 562 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 KANSL1Q7Z3B3 1105 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.47□□□□□ -1.53
RTN4-215ENST00000491592 TP53I13Q8NBR0 393 aaPredicted RBP5.47□□□□□ -1.53
RTN4-215ENST00000491592 C20orf173Q96LM9 149 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 SMAD5Q99717 465 aaKnown RBP5.47□□□□□ -1.53
RTN4-215ENST00000491592 CARD11Q9BXL7 1154 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TSPY26PQ9H489 355 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 KMT5AQ9NQR1 393 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 FBXO10Q9UK96 956 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TRHDEQ9UKU6 1024 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TMCC3Q9ULS5 477 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 SPEF1Q9Y4P9 236 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 TTLL3Q9Y4R7 772 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 DGKBQ9Y6T7 804 aa5.47□□□□□ -1.53
RTN4-215ENST00000491592 CENPJQ9HC77 1338 aaPredicted RBP5.47□□□□□ -1.53
RTN4-215ENST00000491592 NINLQ9Y2I6 1382 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 FSD2A1L4K1 749 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 GOLGA6L3A6NEY3 463 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 VSTM5A8MXK1 200 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 PIP5K1CO60331 668 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 SNX2O60749 519 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 NBNO60934 754 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 TPM2P07951 284 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 CLEC2LP0C7M8 214 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 IL13P35225 146 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 TSPAN7P41732 249 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 SSR1P43307 286 aaKnown RBP5.46□□□□□ -1.54
RTN4-215ENST00000491592 MRE11P49959 708 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 BCAR1P56945 870 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 NFATC3Q12968 1075 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 STK3Q13188 491 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 MOGSQ13724 837 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 NOLC1Q14978 699 aaKnown RBP eCLIP5.46□□□□□ -1.541e-7■□□□□ 8
RTN4-215ENST00000491592 PDCD1Q15116 288 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 RGL3Q3MIN7 710 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 FAM26FQ5R3K3 315 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 ARMC3Q5W041 872 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 GRAMD4Q6IC98 578 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 C1orf228Q6PIY5 440 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 UNQ6494/PRO21346Q6UXR6 183 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 SKAP1Q86WV1 359 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 NBPF5PQ86XG9 351 aaPredicted RBP5.46□□□□□ -1.54
RTN4-215ENST00000491592 EGFL6Q8IUX8 553 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 OR8H2Q8N162 312 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 NUDT10Q8NFP7 164 aa5.46□□□□□ -1.54
RTN4-215ENST00000491592 ADAMTS17Q8TE56 1095 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms