RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 TUSC3Q13454 348 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 HSP90AA2PQ14568 343 aaPredicted RBP9.1□□□□□ -0.95
LSM2-213ENST00000491421 PTPN21Q16825 1174 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 ATF7IP2Q5U623 682 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 KIAA0319Q5VV43 1072 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 EEF1DP3Q658K8 133 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 FUT10Q6P4F1 479 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 ELMSAN1Q6PJG2 1045 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 APBB1IPQ7Z5R6 666 aaPredicted RBP9.1□□□□□ -0.95
LSM2-213ENST00000491421 RNF168Q8IYW5 571 aaPredicted RBP9.1□□□□□ -0.95
LSM2-213ENST00000491421 RABGGTAQ92696 567 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 B3GALT6Q96L58 329 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 DRC1Q96MC2 740 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 MFSD14AQ96MC6 490 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 MMTAG2Q9BU76 263 aaKnown RBP9.1□□□□□ -0.95
LSM2-213ENST00000491421 RUSC1Q9BVN2 902 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 DPP7Q9UHL4 492 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 ADAM28Q9UKQ2 775 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 GDAQ9Y2T3 454 aa9.1□□□□□ -0.95
LSM2-213ENST00000491421 SF3B1O75533 1304 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSM2-213ENST00000491421 PHLPP2Q6ZVD8 1323 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 VWA3AA6NCI4 1184 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 TMEM221A6NGB7 291 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 C2CD4DB7Z1M9 353 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 M0R296 226 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 PTGESO14684 152 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 TADA2AO75478 443 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 GLUD1P00367 558 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 THP07101 528 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 NPTX2P47972 431 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 CREMQ03060 361 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 SIGLEC14Q08ET2 396 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 USP41Q3LFD5 358 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 NT5DC1Q5TFE4 455 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 LARP1BQ659C4 914 aaKnown RBP9.09□□□□□ -0.95
LSM2-213ENST00000491421 RINT1Q6NUQ1 792 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 KCNK18Q7Z418 384 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 GPR149Q86SP6 731 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 DAW1Q8N136 415 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 TDRD5Q8NAT2 981 aaKnown RBP9.09□□□□□ -0.95
LSM2-213ENST00000491421 HASPINQ8TF76 798 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 RIN2Q8WYP3 895 aaPredicted RBP9.09□□□□□ -0.95
LSM2-213ENST00000491421 CDK5RAP3Q96JB5 506 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 PAAF1Q9BRP4 392 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 TIPINQ9BVW5 301 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 MRPL4Q9BYD3 311 aaKnown RBP9.09□□□□□ -0.95
LSM2-213ENST00000491421 NT5C3AQ9H0P0 336 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 RXFP1Q9HBX9 757 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 KMT5AQ9NQR1 393 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 MAN1C1Q9NR34 630 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.09□□□□□ -0.95
LSM2-213ENST00000491421 CHST7Q9NS84 486 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 CACNG4Q9UBN1 327 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 TNFSF13BQ9Y275 285 aa9.09□□□□□ -0.95
LSM2-213ENST00000491421 KIF4AO95239 1232 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 MYBP10242 640 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 GUCY2CP25092 1073 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 VASPP50552 380 aaPredicted RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 YARSP54577 528 aaKnown RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 RAD51AP2Q09MP3 1159 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 MAPK7Q13164 816 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 MTMR3Q13615 1198 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 NAB2Q15742 525 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 ZNF568Q3ZCX4 644 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 HYIQ5T013 277 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 ARL6IP4Q66PJ3 421 aaKnown RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 C15orf39Q6ZRI6 1047 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 CCDC149Q6ZUS6 474 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 C1orf186Q6ZWK4 172 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 BMP8AQ7Z5Y6 402 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 PALB2Q86YC2 1186 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 GLYCTKQ8IVS8 523 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 GPR65Q8IYL9 337 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 PLCD3Q8N3E9 789 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 KCTD17Q8N5Z5 321 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 KREMEN2Q8NCW0 462 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 CMASQ8NFW8 434 aaPredicted RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 FEZF2Q8TBJ5 459 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 PBXIP1Q96AQ6 731 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 PNMA5Q96PV4 448 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 PLIN2Q99541 437 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 CXCL16Q9H2A7 254 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 C17orf75Q9HAS0 396 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 TOPORSQ9NS56 1045 aaPredicted RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 FNIP2Q9P278 1114 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 ARHGAP28Q9P2N2 729 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 USTQ9Y2C2 406 aa9.08□□□□□ -0.96
LSM2-213ENST00000491421 RBM19Q9Y4C8 960 aaKnown RBP9.08□□□□□ -0.96
LSM2-213ENST00000491421 CCDC195A0A1B0GUA6 201 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 SLC16A4O15374 487 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 TGM5O43548 720 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 BMP15O95972 392 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 PLA2G4BP0C869 781 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 SPATA31D3P0C874 917 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 PLS3P13797 630 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 RPL17P18621 184 aaKnown RBP9.07□□□□□ -0.96
LSM2-213ENST00000491421 GRM5P41594 1212 aa9.07□□□□□ -0.96
LSM2-213ENST00000491421 SMTNP53814 917 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms