RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 SERPINC1P01008 464 aa23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 HSP90AA2PQ14568 343 aaPredicted RBP23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 GPNMBQ14956 572 aa23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 TWF2Q6IBS0 349 aaKnown RBP23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 APBB1IPQ7Z5R6 666 aaPredicted RBP23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 THNSL1Q8IYQ7 743 aa23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 TMEM199Q8N511 208 aa23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 TMX1Q9H3N1 280 aa23.67■■□□□ 1.38
VCPKMT-204ENST00000491402 ZNF233A6NK53 670 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 NPTXRO95502 500 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 TNFSF9P41273 254 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 SARM1Q6SZW1 724 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 INTS8Q75QN2 995 aaKnown RBP23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 DEFB128Q7Z7B8 93 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 TRIM59Q8IWR1 403 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 LBHD1Q9BQE6 289 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 TRIM6Q9C030 488 aaPredicted RBP23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 TAB2Q9NYJ8 693 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 CITO14578 2027 aa23.66■■□□□ 1.38
VCPKMT-204ENST00000491402 PARNO95453 639 aaKnown RBP23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 BFSP1Q12934 665 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 UBXN11Q5T124 520 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 CPSF3Q9UKF6 684 aaKnown RBP23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 PRKCSHP14314 528 aaPredicted RBP23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 ZSCAN20P17040 1043 aaPredicted RBP23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 OSTNP61366 133 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 CYP24A1Q07973 514 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 MFSD14AQ96MC6 490 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 RBAKQ9NYW8 714 aaPredicted RBP23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 ANK1P16157 1881 aa23.65■■□□□ 1.38
VCPKMT-204ENST00000491402 MGEA5O60502 916 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 KRT13P13646 458 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 COPB1P53618 953 aaKnown RBP23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 MAN2A1Q16706 1144 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 KYAT1Q16773 422 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 DCAF17Q5H9S7 520 aaPredicted RBP23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 TMEM192Q8IY95 271 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 VPS16Q9H269 839 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 IFNKQ9P0W0 207 aa23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.64■■□□□ 1.37
VCPKMT-204ENST00000491402 STAG3L1P0CL83 205 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 UBASH3AP57075 661 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 FPGSQ05932 587 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 DSC3Q14574 896 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 PLEKHG4Q58EX7 1191 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 MIIPQ5JXC2 388 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 BRSK2Q8IWQ3 736 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 SLC35C1Q96A29 364 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 VWCEQ96DN2 955 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 NAP1L5Q96NT1 182 aaPredicted RBP23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 NXF3Q9H4D5 531 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 LTBP2Q14767 1821 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 CLTAP09496 248 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 ACRP10323 421 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 GRM5P41594 1212 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 MAGEA10P43363 369 aaPredicted RBP23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 VAMP7P51809 220 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 ENOX2Q16206 610 aaKnown RBP23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 TCERG1LQ5VWI1 586 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 PLEKHO2Q8TD55 490 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 TRIM5Q9C035 493 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 HES2Q9Y543 173 aa23.63■■□□□ 1.37
VCPKMT-204ENST00000491402 A0A1B0GTH6 734 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 CXCL10P02778 98 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 TPM2P07951 284 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 RFC2P35250 354 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 PARD3BQ8TEW8 1205 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 CCDC127Q96BQ5 260 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 ADAM2Q99965 735 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 TRAIPQ9BWF2 469 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 XPO4Q9C0E2 1151 aaKnown RBP23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 FAM105AQ9NUU6 356 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 IPPQ9Y573 584 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 TRIP11Q15643 1979 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 RALGAPA2Q2PPJ7 1873 aa23.62■■□□□ 1.37
VCPKMT-204ENST00000491402 TRIM49P0CI25 452 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 TRIM49CP0CI26 452 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 CXCL8P10145 99 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 EPHB4P54760 987 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 WNT7BP56706 349 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 MCCD1P59942 119 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 DLG4P78352 724 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 PSMD6Q15008 389 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 VWA3BQ502W6 1294 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 C16orf59Q7L2K0 433 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 DBF4BQ8NFT6 615 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 CCDC94Q9BW85 323 aaPredicted RBP23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 FTHL17Q9BXU8 183 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 RPF1Q9H9Y2 349 aaKnown RBP23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 PCDHB2Q9Y5E7 798 aa23.61■■□□□ 1.37
VCPKMT-204ENST00000491402 PES1O00541 588 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 POU5F1Q01860 360 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 PPP2R3AQ06190 1150 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 ENPEPQ07075 957 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 PPIGQ13427 754 aaKnown RBP eCLIP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 FILIP1LQ4L180 1135 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 USP37Q86T82 979 aa23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 RPUSD2Q8IZ73 545 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 SMG8Q8ND04 991 aaKnown RBP23.6■■□□□ 1.37
VCPKMT-204ENST00000491402 TMC2Q8TDI7 906 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms