RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 GPRC5DQ9NZD1 345 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ADAM21Q9UKJ8 722 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 THSD7AQ9UPZ6 1657 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ZRANB2O95218 330 aaKnown RBP eCLIP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GNAT1P11488 350 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CYP24A1Q07973 514 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GJB7Q6PEY0 223 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SH2D3AQ9BRG2 576 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 FAM129AQ9BZQ8 928 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 RBM12Q9NTZ6 932 aaKnown RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ANAPC5Q9UJX4 755 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GTF3C4Q9UKN8 822 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 DUSP10Q9Y6W6 482 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 RREB1Q92766 1687 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 TBC1D8O95759 1140 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 HLA-DRAP01903 254 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GGCXP38435 758 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CASP5P51878 434 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 RTP1P59025 263 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SHROOM1Q2M3G4 852 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 LGSNQ5TDP6 509 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 LRIG3Q6UXM1 1119 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 TTC13Q8NBP0 860 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GLIS3Q8NEA6 775 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GPRC5AQ8NFJ5 357 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SREK1Q8WXA9 508 aaKnown RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 HINFPQ9BQA5 517 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GLIS2Q9BZE0 524 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 TOPORSQ9NS56 1045 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ATP8A1Q9Y2Q0 1164 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 PTPN22Q9Y2R2 807 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 COL5A3P25940 1745 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 FOXN3O00409 490 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 LCA5LO95447 670 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 TCF7P36402 384 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 CDR2Q01850 454 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ADCY2Q08462 1091 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 BEND6Q5SZJ8 279 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 C6orf118Q5T5N4 469 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 METTL7BQ6UX53 244 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SENP7Q9BQF6 1050 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 SPATC1LQ9H0A9 340 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 GPRC5CQ9NQ84 441 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 PRMT7Q9NVM4 692 aaPredicted RBP7.85□□□□□ -1.15
NPHP3-208ENST00000490993 ERAP1Q9NZ08 941 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 TFR2Q9UP52 801 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 NOD1Q9Y239 953 aa7.85□□□□□ -1.15
NPHP3-208ENST00000490993 E7EVH7 732 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 RBAK-RBAKDNI3L0D1 243 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PHF2O75151 1096 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ITGB5P18084 799 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 NCOA4Q13772 614 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ACAD10Q6JQN1 1059 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PPP1R21Q6ZMI0 780 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 RIOX2Q8IUF8 465 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ZBTB9Q96C00 473 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 MS4A14Q96JA4 679 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 TTYH3Q9C0H2 523 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PLAAQ9Y263 795 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF131P52739 623 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 OSTNP61366 133 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF484Q5JVG2 852 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 EPM2AIP1Q7L775 607 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 CBWD2Q8IUF1 395 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 HEXIM2Q96MH2 286 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 TSNARE1Q96NA8 513 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PARK7Q99497 189 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PAIP2Q9BPZ3 127 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 DDX47Q9H0S4 455 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 SNX25Q9H3E2 840 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ANKZF1Q9H8Y5 726 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 MYH6P13533 1939 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ACOT2P49753 483 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ALDH5A1P51649 535 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 SARNPP82979 210 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PDZD4Q76G19 769 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PNKPQ96T60 521 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 GMLQ99445 158 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 C11orf70Q9BRQ4 267 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 FUT8Q9BYC5 575 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 GCOM2Q9BZD3 368 aaPredicted RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 ISCUQ9H1K1 167 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 CYP39A1Q9NYL5 469 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 HPCAL4Q9UM19 191 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 GRIN3BO60391 1043 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 VIMP08670 466 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 NCKAP1LP55160 1127 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 STILQ15468 1287 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 C11orf63Q6NUN7 778 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 POTEAQ6S8J7 498 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 CGRRF1Q99675 332 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 VPS37BQ9H9H4 285 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 A1CFQ9NQ94 594 aaKnown RBP7.84□□□□□ -1.15
NPHP3-208ENST00000490993 WDR35Q9P2L0 1181 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 PCDHGC5Q9Y5F6 944 aa7.84□□□□□ -1.15
NPHP3-208ENST00000490993 FAM170AA1A519 330 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 NR1D1P20393 614 aa7.83□□□□□ -1.16
NPHP3-208ENST00000490993 KAZNQ674X7 775 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms