RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 GPR62Q9BZJ7 368 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 PLEKHA4Q9H4M7 779 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 PDZD7Q9H5P4 517 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 CHST7Q9NS84 486 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 SNTG2Q9NY99 539 aa21.76■■□□□ 1.07
SREBF1-216ENST00000490796 ACKR2O00590 384 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 THP07101 528 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 SPATA31D3P0C874 917 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 FXR2P51116 673 aaKnown RBP eCLIP21.75■■□□□ 1.07
SREBF1-216ENST00000490796 EFNA5P52803 228 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 NUBP1P53384 320 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 SPATA31D4Q6ZUB0 917 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 GPR65Q8IYL9 337 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 BSNDQ8WZ55 320 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 SMG7Q92540 1137 aaKnown RBP21.75■■□□□ 1.07
SREBF1-216ENST00000490796 KIFAP3Q92845 792 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 BHMT2Q9H2M3 363 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 SMOC2Q9H3U7 446 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 FNIP2Q9P278 1114 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 KIAA1024Q9UPX6 916 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 KIF3AQ9Y496 699 aa21.75■■□□□ 1.07
SREBF1-216ENST00000490796 CASTOR2A6NHX0 329 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 RECQL4O94761 1208 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 EFEMP2O95967 443 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 TCF15Q12870 199 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 TDGQ13569 410 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 DCAF4L1Q3SXM0 396 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 CEP57Q86XR8 500 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 FEZF2Q8TBJ5 459 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 SNX29Q8TEQ0 813 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 ATOH1Q92858 354 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-216ENST00000490796 DAXXQ9UER7 740 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-216ENST00000490796 FBXL21Q9UKT6 434 aa21.74■■□□□ 1.07
SREBF1-216ENST00000490796 RFPL2O75678 378 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 C1RP00736 705 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 PDIA5Q14554 519 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 NBR1Q14596 966 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 HASPINQ8TF76 798 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 TTPALQ9BTX7 342 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 WDR6Q9NNW5 1121 aaKnown RBP21.73■■□□□ 1.07
SREBF1-216ENST00000490796 DDX19AQ9NUU7 478 aaKnown RBP21.73■■□□□ 1.07
SREBF1-216ENST00000490796 IGSF9Q9P2J2 1179 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 GDAQ9Y2T3 454 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 CLUHO75153 1309 aa21.73■■□□□ 1.07
SREBF1-216ENST00000490796 TTLL13PA6NNM8 815 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 TGM5O43548 720 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 CENPBP07199 599 aaPredicted RBP21.72■■□□□ 1.07
SREBF1-216ENST00000490796 RPL17P18621 184 aaKnown RBP21.72■■□□□ 1.07
SREBF1-216ENST00000490796 ELAVL2Q12926 359 aaKnown RBP21.72■■□□□ 1.07
SREBF1-216ENST00000490796 PTGDRQ13258 359 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 FAM171A1Q5VUB5 890 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 KRT79Q5XKE5 535 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 FLCNQ8NFG4 579 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 KIFC3Q9BVG8 833 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 RHOBTB2Q9BYZ6 727 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 CCDC113Q9H0I3 377 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 KCNK12Q9HB15 430 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 POLD4Q9HCU8 107 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 ZDHHC7Q9NXF8 308 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 CACNG4Q9UBN1 327 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 DNM3Q9UQ16 869 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 USP20Q9Y2K6 914 aa21.72■■□□□ 1.07
SREBF1-216ENST00000490796 CCDC169A6NNP5 214 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 K7ERI5 159 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 ECM1Q16610 540 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 ATF7IP2Q5U623 682 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 ASTLQ6HA08 431 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-216ENST00000490796 PDXDC1Q6P996 788 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 PRSS55Q6UWB4 352 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-216ENST00000490796 PAAF1Q9BRP4 392 aa21.71■■□□□ 1.07
SREBF1-216ENST00000490796 LAD1O00515 517 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 GALR2O43603 387 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-216ENST00000490796 KIF4AO95239 1232 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 U2AF2P26368 475 aaKnown RBP eCLIP21.7■■□□□ 1.06
SREBF1-216ENST00000490796 RTP2Q5QGT7 225 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 LIN9Q5TKA1 542 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 EEF1DP3Q658K8 133 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 MCTP1Q6DN14 999 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 C4orf32Q8N8J7 132 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 PHOX2BQ99453 314 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 NT5C3AQ9H0P0 336 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 FAM86C1Q9NVL1 165 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 DUSP12Q9UNI6 340 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 KMT2EQ8IZD2 1858 aa21.7■■□□□ 1.06
SREBF1-216ENST00000490796 DENND4AQ7Z401 1863 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 H0Y858 1186 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 PTGESO14684 152 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 RFX1P22670 979 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 YARSP54577 528 aaKnown RBP21.69■■□□□ 1.06
SREBF1-216ENST00000490796 PSMD5Q16401 504 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 DTHD1Q6ZMT9 781 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 PIK3R5Q8WYR1 880 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 PRKD2Q9BZL6 878 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 PCDHB6Q9Y5E3 794 aa21.69■■□□□ 1.06
SREBF1-216ENST00000490796 C2orf16Q68DN1 1984 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 STK25O00506 426 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 ST18O60284 1047 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 ZMYND10O75800 440 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 CLCN5P51795 746 aa21.68■■□□□ 1.06
SREBF1-216ENST00000490796 PEX3P56589 373 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms