RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 RSPH1Q8WYR4 309 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 HVCN1Q96D96 273 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 ZNF558Q96NG5 402 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 FAM193BQ96PV7 902 aaPredicted RBP10.05□□□□□ -0.8
ECM1-205ENST00000490346 RPS6KC1Q96S38 1066 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 CCDC94Q9BW85 323 aaPredicted RBP10.05□□□□□ -0.8
ECM1-205ENST00000490346 STRA6Q9BX79 667 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 CXCL16Q9H2A7 254 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 ALG13Q9NP73 1137 aaKnown RBP10.05□□□□□ -0.8
ECM1-205ENST00000490346 KANSL3Q9P2N6 904 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 DNAJB4Q9UDY4 337 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 PLAGL2Q9UPG8 496 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 STXBP5LQ9Y2K9 1186 aa10.05□□□□□ -0.8
ECM1-205ENST00000490346 PLXNA4Q9HCM2 1894 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 ZMYM2Q9UBW7 1377 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 TDRD15B5MCY1 1934 aaKnown RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 PVALEFA0A1B0GWK0 134 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 NT5C1B-RDH14C9J2C7 533 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 GRM6O15303 877 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 GTPBP6O43824 516 aaPredicted RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 GADD45BO75293 160 aaPredicted RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 FGF18O76093 207 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 DDHD2O94830 711 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 PRPF6O94906 941 aaKnown RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 FAM160A1Q05DH4 1040 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 EHHADHQ08426 723 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 SNW1Q13573 536 aaKnown RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 ALCAMQ13740 583 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 L1TD1Q5T7N2 865 aaKnown RBP10.04□□□□□ -0.8
ECM1-205ENST00000490346 SYCP3Q8IZU3 236 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 TMEM87AQ8NBN3 555 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 P2RX5Q93086 422 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 ACAP3Q96P50 834 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 ACCSQ96QU6 501 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 PCDHB13Q9Y5F0 798 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 MTCH2Q9Y6C9 303 aa10.04□□□□□ -0.8
ECM1-205ENST00000490346 A0A0B4J269 797 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 PTGESO14684 152 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 KLRC4O43908 158 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 MYL1P05976 194 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 GALTP07902 379 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 POU3F3P20264 500 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 DNAJB1P25685 340 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 PPM1AP35813 382 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 TNFSF9P41273 254 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 SLC11A1P49279 550 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 ALDH7A1P49419 539 aaKnown RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 YARSP54577 528 aaKnown RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 GRIK3Q13003 919 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 CCDC85BQ15834 202 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 KMT5BQ4FZB7 885 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 GLRA4Q5JXX5 417 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 ZBTB41Q5SVQ8 909 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 STXBP4Q6ZWJ1 553 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 TMEM173Q86WV6 379 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 COLGALT2Q8IYK4 626 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 SLC39A11Q8N1S5 342 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 ENGASEQ8NFI3 743 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 MAFAQ8NHW3 353 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 SPPL3Q8TCT6 385 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 POF1BQ8WVV4 589 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 PPM1EQ8WY54 764 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 MRPL38Q96DV4 380 aaKnown RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 MSTO1Q9BUK6 570 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 SLC39A2Q9NP94 309 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 TOPORSQ9NS56 1045 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 EXOC1Q9NV70 894 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 SPG21Q9NZD8 308 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 EXOC7Q9UPT5 735 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 PRG3Q9Y2Y8 225 aaPredicted RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 PRRC2BQ5JSZ5 2229 aaKnown RBP10.03□□□□□ -0.8
ECM1-205ENST00000490346 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
ECM1-205ENST00000490346 ATG2AQ2TAZ0 1938 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 OGTO15294 1046 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 EIF3DO15371 548 aaKnown RBP eCLIP10.02□□□□□ -0.81
ECM1-205ENST00000490346 MEFVO15553 781 aaPredicted RBP10.02□□□□□ -0.81
ECM1-205ENST00000490346 FAM189A1O60320 539 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 NR1I2O75469 434 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 SLC34A2O95436 690 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 ALDH2P05091 517 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 THP07101 528 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 CXCL8P10145 99 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 ADSSP30520 456 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 HOXD13P35453 343 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 OR1G1P47890 313 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 PLCB3Q01970 1234 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 KRT17Q04695 432 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 DSC1Q08554 894 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 DPYDQ12882 1025 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 CAMK1Q14012 370 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 POSTNQ15063 836 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 PTPROQ16827 1216 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 SLFN12LQ6IEE8 588 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 EPM2AIP1Q7L775 607 aaPredicted RBP10.02□□□□□ -0.81
ECM1-205ENST00000490346 NELFCDQ8IXH7 590 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 BCL7CQ8WUZ0 217 aaPredicted RBP10.02□□□□□ -0.81
ECM1-205ENST00000490346 SCFD1Q8WVM8 642 aa10.02□□□□□ -0.81
ECM1-205ENST00000490346 POMGNT1Q8WZA1 660 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms