RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 FAM26DQ5JW98 314 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 GBP6Q6ZN66 633 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CATSPER4Q7RTX7 472 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 APBB1IPQ7Z5R6 666 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CNGA4Q8IV77 575 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 LRRC8AQ8IWT6 810 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CCDC155Q8N6L0 562 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 TMEM40Q8WWA1 233 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CCDC51Q96ER9 411 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 PLCB1Q9NQ66 1216 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 RBAKQ9NYW8 714 aaPredicted RBP15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CAPN11Q9UMQ6 739 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 CDY2AQ9Y6F7 541 aa15.38■□□□□ 0.05
VPS26A-205ENST00000489656 LRRIQ3A6PVS8 624 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 AKR1B15C9JRZ8 316 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 MNX1P50219 401 aaPredicted RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 DLG4P78352 724 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 MYL7Q01449 175 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 PPP3CAQ08209 521 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 RBL2Q08999 1139 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 ZBTB41Q5SVQ8 909 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 DPY19L2P1Q6NXN4 242 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 NOTUMQ6P988 496 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 TC2NQ8N9U0 490 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 CACTINQ8WUQ7 758 aaKnown RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 DHX38Q92620 1227 aaKnown RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 CPB2Q96IY4 423 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 ADPGKQ9BRR6 497 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 TMEM8AQ9HCN3 771 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 TRMT13Q9NUP7 481 aaKnown RBP15.37■□□□□ 0.05
VPS26A-205ENST00000489656 FBXL5Q9UKA1 691 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 GINS2Q9Y248 185 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 COQ4Q9Y3A0 265 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 DAAM1Q9Y4D1 1078 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 SQORQ9Y6N5 450 aa15.37■□□□□ 0.05
VPS26A-205ENST00000489656 B4GALT4O60513 344 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 MFAP3LO75121 409 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 SGPL1O95470 568 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CHRNA1P02708 482 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CLTAP09496 248 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 TRIM21P19474 475 aaKnown RBP15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CASP14P31944 242 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 KLK7P49862 253 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 MXI1P50539 228 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 AP3M2P53677 418 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CBWD6Q4V339 395 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CBWD3Q5JTY5 395 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CBWD5Q5RIA9 395 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 SLC27A1Q6PCB7 646 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 C15orf39Q6ZRI6 1047 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 FAM228AQ86W67 206 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 NEK11Q8NG66 645 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 PCMTD1Q96MG8 357 aaPredicted RBP15.36■□□□□ 0.05
VPS26A-205ENST00000489656 PANX2Q96RD6 677 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 CGRRF1Q99675 332 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 TMEM117Q9H0C3 514 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 KCNF1Q9H3M0 494 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 NOD1Q9Y239 953 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 TDRD15B5MCY1 1934 aaKnown RBP15.36■□□□□ 0.05
VPS26A-205ENST00000489656 BRCA2P51587 3418 aa15.36■□□□□ 0.05
VPS26A-205ENST00000489656 KIAA0100Q14667 2235 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 TTC26A0AVF1 554 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 NOL4O94818 638 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 IL18RAPO95256 599 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 HARSP12081 509 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 FGFR4P22455 802 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 FECHP22830 423 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 PON1P27169 355 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 THPOP40225 353 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 TNFSF9P41273 254 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 GRM5P41594 1212 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 GCLMP48507 274 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 FXR1P51114 621 aaKnown RBP eCLIP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 CETN1Q12798 172 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 EPC2Q52LR7 807 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 KRT39Q6A163 491 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 ANKLE1Q8NAG6 615 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 CCDC112Q8NEF3 446 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 U2AF1L4Q8WU68 220 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 CCDC127Q96BQ5 260 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 FNBP1Q96RU3 617 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 LSM14BQ9BX40 385 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 GANQ9H2C0 597 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 MMRN2Q9H8L6 949 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 GCNT4Q9P109 453 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 CEP72Q9P209 647 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 LUC7L2Q9Y383 392 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 NOC2LQ9Y3T9 749 aaKnown RBP15.35■□□□□ 0.05
VPS26A-205ENST00000489656 MROH7Q68CQ1 1323 aa15.35■□□□□ 0.05
VPS26A-205ENST00000489656 SCN5AQ14524 2016 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 RPS6KA5O75582 802 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 STAG3L1P0CL83 205 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 SLC9A1P19634 815 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 WNT7BP56706 349 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 ZBED6P86452 979 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 ENOX2Q16206 610 aaKnown RBP15.34■□□□□ 0.05
VPS26A-205ENST00000489656 FBXO47Q5MNV8 452 aa15.34■□□□□ 0.05
VPS26A-205ENST00000489656 TRIM65Q6PJ69 517 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms