RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 EIF2AQ9BY44 585 aaKnown RBP11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 TRIM9Q9C026 710 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 GBP3Q9H0R5 595 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 TNMDQ9H2S6 317 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 FZD8Q9H461 694 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 GIT1Q9Y2X7 761 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 NCOR1O75376 2440 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 PLXNA4Q9HCM2 1894 aa11.61□□□□□ -0.55
SCAMP4-208ENST00000489554 TCF20Q9UGU0 1960 aaKnown RBP11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 ZMYM2Q9UBW7 1377 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 NPHP3-ACAD11A0A0J9YXS1 232 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 NT5C1B-RDH14C9J2C7 533 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 PER2O15055 1255 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 B4GALT5O43286 388 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 MBTPS2O43462 519 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 GLP2RO95838 553 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 ALDH2P05091 517 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 SLC11A1P49279 550 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 EFNA5P52803 228 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 EHHADHQ08426 723 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 MAPK7Q13164 816 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 GIT2Q14161 759 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 CLUL1Q15846 466 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 NT5DC1Q5TFE4 455 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 RINT1Q6NUQ1 792 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 TMEM184AQ6ZMB5 413 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 SV2BQ7L1I2 683 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 ZNF280BQ86YH2 543 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 CEP57L1Q8IYX8 460 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 DAW1Q8N136 415 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 GJD3Q8N144 294 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 MRPL43Q8N983 215 aaKnown RBP11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 SMRP1Q8NCR6 262 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 BSNDQ8WZ55 320 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 POP1Q99575 1024 aaKnown RBP11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 FUCA2Q9BTY2 467 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 BLZF1Q9H2G9 400 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 CLEC1BQ9P126 229 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 DNAJB4Q9UDY4 337 aa11.6□□□□□ -0.55
SCAMP4-208ENST00000489554 FRMD3A2A2Y4 597 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 C2orf71A6NGG8 1288 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ARL5CA6NH57 179 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 HIDE1A8MVS5 230 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ACKR2O00590 384 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 N4BP3O15049 544 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 DDHD2O94830 711 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 NPTXRO95502 500 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 POMCP01189 267 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 PRKCBP05771 671 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 BMP6P22004 513 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 MLH1P40692 756 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ZP2Q05996 745 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 PRPF4BQ13523 1007 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 DHX8Q14562 1220 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 TMEM132AQ24JP5 1023 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ZSCAN23Q3MJ62 389 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 KANK3Q6NY19 840 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 GPBP1Q86WP2 473 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 TMEM173Q86WV6 379 aaPredicted RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 VPS52Q8N1B4 723 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 DDX12PQ92771 950 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 GAD1Q99259 594 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ADPGKQ9BRR6 497 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 TIPINQ9BVW5 301 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 C1QTNF1Q9BXJ1 281 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 CCDC113Q9H0I3 377 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ZBP1Q9H171 429 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 RNF39Q9H2S5 420 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 NXF3Q9H4D5 531 aaKnown RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 KIAA1468Q9P260 1216 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 BARX2Q9UMQ3 279 aaPredicted RBP11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 FAN1Q9Y2M0 1017 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 HES2Q9Y543 173 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 IRAK3Q9Y616 596 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 MUC3AQ02505 3323 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 PHLPP2Q6ZVD8 1323 aa11.59□□□□□ -0.55
SCAMP4-208ENST00000489554 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 B4GALT3O60512 393 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 CXCL14O95715 111 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 MYL1P05976 194 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 CTSAP10619 480 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 GUCY2CP25092 1073 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 MRE11P49959 708 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 AFF1P51825 1210 aaKnown RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 CACNB1Q02641 598 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 KCNC3Q14003 757 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 APBB1IPQ7Z5R6 666 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 CDR2LQ86X02 465 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 COLGALT2Q8IYK4 626 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 VN1R2Q8NFZ6 395 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 BCL7CQ8WUZ0 217 aaPredicted RBP11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 CASP10Q92851 521 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 DRC1Q96MC2 740 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 FIZ1Q96SL8 496 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 REEP2Q9BRK0 252 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
SCAMP4-208ENST00000489554 C17orf75Q9HAS0 396 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms