RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 HVCN1Q96D96 273 aa19■□□□□ 0.63
MDC1-206ENST00000489540 MRPL44Q9H9J2 332 aaKnown RBP19■□□□□ 0.63
MDC1-206ENST00000489540 TOPORSQ9NS56 1045 aaPredicted RBP19■□□□□ 0.63
MDC1-206ENST00000489540 B4GALT3O60512 393 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 CSPG5O95196 566 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 THP07101 528 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 OR1G1P47890 313 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 NOLC1Q14978 699 aaKnown RBP eCLIP18.99■□□□□ 0.63
MDC1-206ENST00000489540 KYAT1Q16773 422 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 AAK1Q2M2I8 961 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 TMC7Q7Z402 723 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 MAP4K3Q8IVH8 894 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 STAMQ92783 540 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 ZBTB45Q96K62 511 aaPredicted RBP18.99■□□□□ 0.63
MDC1-206ENST00000489540 ACAP3Q96P50 834 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 C7orf25Q9BPX7 421 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 TCF25Q9BQ70 676 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 COLEC11Q9BWP8 271 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 TRIM9Q9C026 710 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 OLFML3Q9NRN5 406 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 ANKFY1Q9P2R3 1169 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 PCDHB13Q9Y5F0 798 aa18.99■□□□□ 0.63
MDC1-206ENST00000489540 COL6A3P12111 3177 aa18.98■□□□□ 0.63
MDC1-206ENST00000489540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.98■□□□□ 0.63
MDC1-206ENST00000489540 HNRNPDLO14979 420 aaKnown RBP18.98■□□□□ 0.63
MDC1-206ENST00000489540 MATR3P43243 847 aaKnown RBP eCLIP18.98■□□□□ 0.63
MDC1-206ENST00000489540 MRPS5P82675 430 aaKnown RBP18.98■□□□□ 0.63
MDC1-206ENST00000489540 ZC2HC1CQ53FD0 456 aaPredicted RBP18.98■□□□□ 0.63
MDC1-206ENST00000489540 TMEM173Q86WV6 379 aaPredicted RBP18.98■□□□□ 0.63
MDC1-206ENST00000489540 CEP57L1Q8IYX8 460 aa18.98■□□□□ 0.63
MDC1-206ENST00000489540 ENTPD7Q9NQZ7 604 aa18.98■□□□□ 0.63
MDC1-206ENST00000489540 USP25Q9UHP3 1055 aa18.98■□□□□ 0.63
MDC1-206ENST00000489540 COL4A4P53420 1690 aaPredicted RBP18.97■□□□□ 0.63
MDC1-206ENST00000489540 A0A1W2PQ27 194 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 A0A1W2PQ64 194 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 A0A1W2PQD8 194 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 SLFN14P0C7P3 912 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 OSTNP61366 133 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 HYAL1Q12794 435 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 TUSC3Q13454 348 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 ALCAMQ13740 583 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 COL19A1Q14993 1142 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 XKR4Q5GH76 650 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 ALKAL1Q6UXT8 129 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 VPS52Q8N1B4 723 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 CEP120Q8N960 986 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 PABPC5Q96DU9 382 aaKnown RBP18.97■□□□□ 0.63
MDC1-206ENST00000489540 STRA6Q9BX79 667 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 EXOC7Q9UPT5 735 aa18.97■□□□□ 0.63
MDC1-206ENST00000489540 NLRC5Q86WI3 1866 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 A0A1B0GVL5 298 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 FSD2A1L4K1 749 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 PTGESO14684 152 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 CLTAP09496 248 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 HARSP12081 509 aaKnown RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 PFKFB1P16118 471 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 ANP32AP39687 249 aaKnown RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 ASIC1P78348 528 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 SMC1AQ14683 1233 aaKnown RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 SLFN12LQ6IEE8 588 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 MRPL43Q8N983 215 aaKnown RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 BCL7CQ8WUZ0 217 aaPredicted RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 ACCSQ96QU6 501 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 CDCA3Q99618 268 aaPredicted RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 IGFLR1Q9H665 355 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 TLE6Q9H808 572 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 UBE2ZQ9H832 354 aaPredicted RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 TBC1D7Q9P0N9 293 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 CIZ1Q9ULV3 898 aaPredicted RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 HPSEQ9Y251 543 aa18.96■□□□□ 0.63
MDC1-206ENST00000489540 PRG3Q9Y2Y8 225 aaPredicted RBP18.96■□□□□ 0.63
MDC1-206ENST00000489540 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 SMIM28A0A1B0GU29 152 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 PPP1R37O75864 691 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 GCNT3O95395 438 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 CXCL14O95715 111 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 L1TD1Q5T7N2 865 aaKnown RBP18.95■□□□□ 0.62
MDC1-206ENST00000489540 PLPP4Q5VZY2 271 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 STXBP4Q6ZWJ1 553 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 RBM23Q86U06 439 aaKnown RBP18.95■□□□□ 0.62
MDC1-206ENST00000489540 ASB2Q96Q27 587 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 PLEKHA5Q9HAU0 1116 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 SLC38A7Q9NVC3 462 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 SERTAD1Q9UHV2 236 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 PCDHGC5Q9Y5F6 944 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 MYH15Q9Y2K3 1946 aa18.95■□□□□ 0.62
MDC1-206ENST00000489540 A0A0B4J269 797 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 CTSAP10619 480 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 KCNE1P15382 129 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 SYKP43405 635 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 NRIP1P48552 1158 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 COASYQ13057 564 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 ADAM15Q13444 863 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 POSTNQ15063 836 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 NAB2Q15742 525 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 CTC1Q2NKJ3 1217 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 ADGRD2Q7Z7M1 963 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 EFHBQ8N7U6 833 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 SNX27Q96L92 541 aa18.94■□□□□ 0.62
MDC1-206ENST00000489540 PPP1R10Q96QC0 940 aaKnown RBP18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms