RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 A0A0G2JLW4 131 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 PDXKO00764 312 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 EYA4O95677 639 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 ESRRBO95718 433 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 USP11P51784 963 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 ANO4Q32M45 955 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 LONP2Q86WA8 852 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 ATL2Q8NHH9 583 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 EIF2AQ9BY44 585 aaKnown RBP18.63■□□□□ 0.57
NPHP4-209ENST00000489180 TAF6LQ9Y6J9 622 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 LRRC36Q1X8D7 754 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 ANKRD7Q92527 254 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 SIK2Q9H0K1 926 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 ARL2BPQ9Y2Y0 163 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 PNPLA7Q6ZV29 1317 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 SEC24DO94855 1032 aaPredicted RBP18.63■□□□□ 0.57
NPHP4-209ENST00000489180 STAT4Q14765 748 aa18.63■□□□□ 0.57
NPHP4-209ENST00000489180 MRPL4Q9BYD3 311 aaKnown RBP18.63■□□□□ 0.57
NPHP4-209ENST00000489180 RAD51CO43502 376 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 PHF2O75151 1096 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 MXD4Q14582 209 aaPredicted RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 C9orf72Q96LT7 481 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 NBPF26B4DH59 902 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 AGTP01019 485 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 SESN2P58004 480 aaPredicted RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 DALRD3Q5D0E6 543 aaKnown RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 RTKN2Q8IZC4 609 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 NBPF15Q8N660 670 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 TTLL6Q8N841 843 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 GRAMD1AQ96CP6 724 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 A8MXQ7 604 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 APOL1O14791 398 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 KCNN4O15554 427 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 ASAP2O43150 1006 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 CCDC22O60826 627 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 MYBP10242 640 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 BYSLQ13895 437 aaKnown RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 RBBP7Q16576 425 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 EFHC2Q5JST6 749 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 LMCD1Q9NZU5 365 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 TRAF3IP3Q9Y228 551 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 DFFAO00273 331 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 YWHABP31946 246 aaKnown RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 LBRQ14739 615 aaKnown RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 DDX42Q86XP3 938 aaKnown RBP eCLIP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 NEDD1Q8NHV4 660 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 REEP2Q9BRK0 252 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 KIFC3Q9BVG8 833 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 HSPBP1Q9NZL4 362 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 MARCOQ9UEW3 520 aaPredicted RBP18.62■□□□□ 0.57
NPHP4-209ENST00000489180 FHOD1Q9Y613 1164 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 ITIH6Q6UXX5 1313 aa18.62■□□□□ 0.57
NPHP4-209ENST00000489180 UBA6A0AVT1 1052 aaPredicted RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 ELF1P32519 619 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 KRT33BQ14525 404 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 CLEC10AQ8IUN9 316 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 ZNF507Q8TCN5 953 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 ULK4Q96C45 1275 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 HOXC10Q9NYD6 342 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 BFARQ9NZS9 450 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 POLIQ9UNA4 740 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 HNRNPCL2B2RXH8 293 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 E5RI56 91 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 HNRNPCL1O60812 293 aaKnown RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 GIMAP8Q8ND71 665 aaPredicted RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 OR6P1Q8NGX9 317 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 TMEM117Q9H0C3 514 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 APEX2Q9UBZ4 518 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 STAP1Q9ULZ2 295 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 MYMKA6NI61 221 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 NEMP1O14524 444 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 UCHL3P15374 230 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 CYTH1Q15438 398 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 LRRC31Q6UY01 552 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 PID1Q7Z2X4 250 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 TTC30BQ8N4P2 665 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 NOA1Q8NC60 698 aaKnown RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 SLC10A4Q96EP9 437 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 CELF4Q9BZC1 486 aaKnown RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 IL25Q9H293 177 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 VIPAS39Q9H9C1 493 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 KIF17Q9P2E2 1029 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 GYPCP04921 128 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 AARSP49588 968 aaKnown RBP eCLIP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 SPP2Q13103 211 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 HIC1Q14526 733 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 C12orf60Q5U649 245 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 TRIM72Q6ZMU5 477 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 CATSPER3Q86XQ3 398 aa18.61■□□□□ 0.57
NPHP4-209ENST00000489180 AFF4Q9UHB7 1163 aaKnown RBP18.61■□□□□ 0.57
NPHP4-209ENST00000489180 DAB2P98082 770 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 TEDDM1Q5T9Z0 273 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 AFG1LQ8WV93 481 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 RBM15Q96T37 977 aaKnown RBP eCLIP18.6■□□□□ 0.578e-10■■■■■ 32.2
NPHP4-209ENST00000489180 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 SUGT1Q9Y2Z0 365 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 ABCA8O94911 1581 aa18.6■□□□□ 0.57
NPHP4-209ENST00000489180 SETD1BQ9UPS6 1966 aaKnown RBP18.6■□□□□ 0.57
NPHP4-209ENST00000489180 ATMINO43313 823 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms