RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 NKX2-4Q9H2Z4 354 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 TYW1Q9NV66 732 aaKnown RBP17.42■□□□□ 0.38
HDAC7-224ENST00000488927 INPP5FQ9Y2H2 1132 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 GDAQ9Y2T3 454 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 PTPRSQ13332 1948 aa17.42■□□□□ 0.38
HDAC7-224ENST00000488927 LCHNA4D1U4 455 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 LINC01553A4QN01 128 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 MEIS3P2A8K0S8 358 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 PDXKO00764 312 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 ADSSP30520 456 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 MLH1P40692 756 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 GATMP50440 423 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 RNASELQ05823 741 aaKnown RBP17.41■□□□□ 0.38
HDAC7-224ENST00000488927 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-224ENST00000488927 CLP1Q92989 425 aaKnown RBP17.41■□□□□ 0.38
HDAC7-224ENST00000488927 TGS1Q96RS0 853 aaKnown RBP17.41■□□□□ 0.38
HDAC7-224ENST00000488927 TSPAN18Q96SJ8 248 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 GAD1Q99259 594 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 HAPLN2Q9GZV7 340 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 PLEKHA5Q9HAU0 1116 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 KIAA1586Q9HCI6 787 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 AGPAT3Q9NRZ7 376 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 MAN1B1Q9UKM7 699 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.41■□□□□ 0.38
HDAC7-224ENST00000488927 LAMA3Q16787 3333 aa17.41■□□□□ 0.38
HDAC7-224ENST00000488927 SOX1O00570 391 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-224ENST00000488927 TGFB1I1O43294 461 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 CALUO43852 315 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-224ENST00000488927 FAM189A1O60320 539 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 LAG3P18627 525 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 OSTNP61366 133 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 TAP1Q03518 808 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 GRIK3Q13003 919 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 CD302Q8IX05 232 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 C12orf56Q8IXR9 622 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 CEP120Q8N960 986 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 TMEM174Q8WUU8 243 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 FAM193BQ96PV7 902 aaPredicted RBP17.4■□□□□ 0.38
HDAC7-224ENST00000488927 KCTD10Q9H3F6 313 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 RPF1Q9H9Y2 349 aaKnown RBP17.4■□□□□ 0.38
HDAC7-224ENST00000488927 TBC1D13Q9NVG8 400 aa17.4■□□□□ 0.38
HDAC7-224ENST00000488927 MRPL42Q9Y6G3 142 aaKnown RBP17.4■□□□□ 0.38
HDAC7-224ENST00000488927 TISP43B9A030 160 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 EXTL3O43909 919 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 ERVK-21P61565 698 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 MORC3Q14149 939 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 MYBPC2Q14324 1141 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 XKR4Q5GH76 650 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 SPOUT1Q5T280 376 aaKnown RBP17.39■□□□□ 0.37
HDAC7-224ENST00000488927 ZNF697Q5TEC3 545 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 ALKAL1Q6UXT8 129 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 SYAP1Q96A49 352 aaPredicted RBP17.39■□□□□ 0.37
HDAC7-224ENST00000488927 SNX27Q96L92 541 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 ZFP42Q96MM3 310 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 CBWD1Q9BRT8 395 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 PLVAPQ9BX97 442 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 KLK14Q9P0G3 267 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 CPSF3Q9UKF6 684 aaKnown RBP17.39■□□□□ 0.37
HDAC7-224ENST00000488927 TRAF3IP3Q9Y228 551 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 PCDHB12Q9Y5F1 795 aa17.39■□□□□ 0.37
HDAC7-224ENST00000488927 LAMA2P24043 3122 aaKnown RBP17.39■□□□□ 0.37
HDAC7-224ENST00000488927 PSMA7O14818 248 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 POMCP01189 267 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 RB1P06400 928 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 THP07101 528 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 SCNN1GP51170 649 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 PPP2R3AQ06190 1150 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 NFIL3Q16649 462 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 LRRC55Q6ZSA7 311 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 SLC9A9Q8IVB4 645 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 TMEM192Q8IY95 271 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 GPD1LQ8N335 351 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 GSTCDQ8NEC7 633 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 LRCH3Q96II8 777 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 TMEM175Q9BSA9 504 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 IKZF4Q9H2S9 585 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 ZNF576Q9H609 170 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 CWH43Q9H720 699 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 HSPBP1Q9NZL4 362 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 CNTN3Q9P232 1028 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 MAPK8IP1Q9UQF2 711 aa17.38■□□□□ 0.37
HDAC7-224ENST00000488927 C5orf67F2Z3F1 127 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 IL18RAPO95256 599 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 ADRB2P07550 413 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 CXCL8P10145 99 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 KCNE1P15382 129 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 RPL13P26373 211 aaKnown RBP17.37■□□□□ 0.37
HDAC7-224ENST00000488927 PPM1AP35813 382 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 BMPR1AP36894 532 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 PRCPP42785 496 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 ALDH7A1P49419 539 aaKnown RBP17.37■□□□□ 0.37
HDAC7-224ENST00000488927 ACOT2P49753 483 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 ENOX2Q16206 610 aaKnown RBP17.37■□□□□ 0.37
HDAC7-224ENST00000488927 SLC10A6Q3KNW5 377 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 SEZ6Q53EL9 994 aa17.37■□□□□ 0.37
HDAC7-224ENST00000488927 SMYD4Q8IYR2 804 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms