RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 RHOT2Q8IXI1 618 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 ZNF366Q8N895 744 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 OR56A1Q8NGH5 318 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 MKL1Q969V6 931 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 ZNF496Q96IT1 587 aaPredicted RBP4.18□□□□□ -1.74
CCDC93-209ENST00000488908 ALOXE3Q9BYJ1 711 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 TBCCD1Q9NVR7 557 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 SLC17A6Q9P2U8 582 aa4.18□□□□□ -1.74
CCDC93-209ENST00000488908 DRGXA6NNA5 263 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 GASTP01350 101 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 RBM25P49756 843 aaKnown RBP4.17□□□□□ -1.74
CCDC93-209ENST00000488908 CHN2P52757 468 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 MRPS35P82673 323 aaKnown RBP4.17□□□□□ -1.74
CCDC93-209ENST00000488908 PPARAQ07869 468 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 SRSF4Q08170 494 aaKnown RBP4.17□□□□□ -1.74
CCDC93-209ENST00000488908 TMEM132CQ8N3T6 1108 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 Q8N9P0 234 aaPredicted RBP4.17□□□□□ -1.74
CCDC93-209ENST00000488908 MDM1Q8TC05 714 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 ARMC5Q96C12 935 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 PHACTR3Q96KR7 559 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 ORAI3Q9BRQ5 295 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 CASS4Q9NQ75 786 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 FOXJ2Q9P0K8 574 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 NUMBLQ9Y6R0 609 aa4.17□□□□□ -1.74
CCDC93-209ENST00000488908 PJA2O43164 708 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 ZFPL1O95159 310 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 ATXN7L2Q5T6C5 722 aaPredicted RBP4.16□□□□□ -1.74
CCDC93-209ENST00000488908 GPR158Q5T848 1215 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 SH2D3CQ8N5H7 860 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 ACTRT2Q8TDY3 377 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 SNX33Q8WV41 574 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 RSAD2Q8WXG1 361 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 FUBP1Q96AE4 644 aaKnown RBP4.16□□□□□ -1.74
CCDC93-209ENST00000488908 CEP95Q96GE4 821 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 PDLIM2Q96JY6 352 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 ZNF778Q96MU6 729 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 HEPHQ9BQS7 1158 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 REXO4Q9GZR2 422 aaKnown RBP4.16□□□□□ -1.74
CCDC93-209ENST00000488908 WNT8AQ9H1J5 351 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 KLK15Q9H2R5 256 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 KLHL11Q9NVR0 708 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 GPRC5DQ9NZD1 345 aa4.16□□□□□ -1.74
CCDC93-209ENST00000488908 EVLQ9UI08 416 aaPredicted RBP4.16□□□□□ -1.74
CCDC93-209ENST00000488908 PRSS38A1L453 326 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 CGB1A6NKQ9 187 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 ELANEP08246 267 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 FLT3LGP49771 235 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 CLRN1P58418 232 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 RBL2Q08999 1139 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 TSHZ3Q63HK5 1081 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 B3GNTL1Q67FW5 361 aaPredicted RBP4.15□□□□□ -1.75
CCDC93-209ENST00000488908 ABHD15Q6UXT9 468 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 KIF18BQ86Y91 864 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 RNF31Q96EP0 1072 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 BOD1Q96IK1 185 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 TMEM74BQ9NUR3 256 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 PRSS50Q9UI38 385 aa4.15□□□□□ -1.75
CCDC93-209ENST00000488908 TMEM127O75204 238 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 F2P00734 622 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 SDSP20132 328 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 CRHR1P34998 444 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 MFSD14BQ5SR56 506 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 PRAMEF14Q5SWL7 426 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 AKNAD1Q5T1N1 836 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 FAM43AQ8N2R8 423 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 LILRB2Q8N423 598 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 OR14C36Q8NHC7 312 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 CHTF18Q8WVB6 975 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 AIFM2Q9BRQ8 373 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 KRTAP1-5Q9BYS1 174 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 RNPEPQ9H4A4 650 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 GALNT9Q9HCQ5 603 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 THG1LQ9NWX6 298 aaKnown RBP4.14□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF70Q9UC06 446 aaPredicted RBP4.14□□□□□ -1.75
CCDC93-209ENST00000488908 DMTF1Q9Y222 760 aa4.14□□□□□ -1.75
CCDC93-209ENST00000488908 A0A1B0GTW7 788 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 TGM5O43548 720 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 SNRPA1P09661 255 aaKnown RBP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 KPNA1P52294 538 aaPredicted RBP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 CXADRP78310 365 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 PHC1P78364 1004 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 DSG1Q02413 1049 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 OCA2Q04671 838 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 FAM47AQ5JRC9 791 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 SOGA3Q5TF21 947 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 KIAA1614Q5VZ46 1190 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF788Q6ZQV5 615 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 MED25Q71SY5 747 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 PTF1AQ7RTS3 328 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF610Q8N9Z0 462 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 SLC35B2Q8TB61 432 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ZNF480Q8WV37 535 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 FUBP3Q96I24 572 aaKnown RBP eCLIP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 PAWRQ96IZ0 340 aaKnown RBP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ZSWIM1Q9BR11 485 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 IGSF5Q9NSI5 407 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ASB6Q9NWX5 421 aa4.13□□□□□ -1.75
CCDC93-209ENST00000488908 MAGEC2Q9UBF1 373 aaPredicted RBP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 ARPP21Q9UBL0 812 aaPredicted RBP4.13□□□□□ -1.75
CCDC93-209ENST00000488908 KCNG1Q9UIX4 513 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms