RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 MRGPREQ86SM8 312 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 AMOTL1Q8IY63 956 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 CNTD1Q8N815 330 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 OR7D4Q8NG98 312 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 PROKR1Q8TCW9 393 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 CHFRQ96EP1 664 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 MLST8Q9BVC4 326 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 TEX101Q9BY14 249 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 IKZF4Q9H2S9 585 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 CLCA2Q9UQC9 943 aa6.54□□□□□ -1.36
PTPN4-212ENST00000488896 NCR1O76036 304 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 RAP2AP10114 183 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 FLT3LGP49771 235 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 PPP3CAQ08209 521 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 FSTL1Q12841 308 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 MALLQ13021 153 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 KLF1Q13351 362 aaPredicted RBP6.53□□□□□ -1.36
PTPN4-212ENST00000488896 TIGD2Q4W5G0 525 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 MBNL2Q5VZF2 373 aaKnown RBP6.53□□□□□ -1.36
PTPN4-212ENST00000488896 KCNV1Q6PIU1 500 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 TTPALQ9BTX7 342 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 SENP6Q9GZR1 1112 aaPredicted RBP6.53□□□□□ -1.36
PTPN4-212ENST00000488896 BCO1Q9HAY6 547 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 SCOCQ9UIL1 159 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 PHLDB1Q86UU1 1377 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 SBNO2Q9Y2G9 1366 aa6.53□□□□□ -1.36
PTPN4-212ENST00000488896 CXorf49A8MYA2 514 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ZNF185O15231 689 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ABHD16AO95870 558 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ZFP36P26651 326 aaKnown RBP6.52□□□□□ -1.37
PTPN4-212ENST00000488896 SREBF1P36956 1147 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 MCAMP43121 646 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 MTNR1BP49286 362 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 DPTQ07507 201 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 FAM47AQ5JRC9 791 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ATXN7L2Q5T6C5 722 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-212ENST00000488896 PGM2L1Q6PCE3 622 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 VRK3Q8IV63 474 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ZFP28Q8NHY6 868 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 DCLRE1CQ96SD1 692 aaKnown RBP6.52□□□□□ -1.37
PTPN4-212ENST00000488896 FZD1Q9UP38 647 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 ATP8A1Q9Y2Q0 1164 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 USP15Q9Y4E8 981 aaPredicted RBP6.52□□□□□ -1.37
PTPN4-212ENST00000488896 GPR45Q9Y5Y3 372 aa6.52□□□□□ -1.37
PTPN4-212ENST00000488896 WDR33Q9C0J8 1336 aaKnown RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 A0A087X1B8 175 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 SUV39H1O43463 412 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 LPXNO60711 386 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 NDUFA10O95299 355 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 ITGB1P05556 798 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 RBP3P10745 1247 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 LAG3P18627 525 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 MGAT1P26572 445 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 IARSP41252 1262 aaKnown RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 CHN2P52757 468 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 INHBCP55103 352 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 CLRN1P58418 232 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 ACAP2Q15057 778 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 ANO4Q32M45 955 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 AFMIDQ63HM1 303 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 DRICH1Q6PGQ1 229 aaPredicted RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 LDLRAD3Q86YD5 345 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 RPUSD2Q8IZ73 545 aaKnown RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 AMER2Q8N7J2 671 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 DPF2Q92785 391 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 LENG9Q96B70 501 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 CEP89Q96ST8 783 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 SLC46A2Q9BY10 475 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 TMX1Q9H3N1 280 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 AKIP1Q9NQ31 210 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 LANCL2Q9NS86 450 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 ANKFY1Q9P2R3 1169 aa6.51□□□□□ -1.37
PTPN4-212ENST00000488896 AJAP1Q9UKB5 411 aaPredicted RBP6.51□□□□□ -1.37
PTPN4-212ENST00000488896 RNASET2O00584 256 aaKnown RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 RAMP2O60895 175 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 MT-CO1P00395 513 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 SNRPA1P09661 255 aaKnown RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 ALOX15P16050 662 aaPredicted RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 FAM50AQ14320 339 aaKnown RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 SEPT2Q15019 361 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 PTPAQ15257 358 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 PDCD4Q53EL6 469 aaKnown RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 LY6G5CQ5SRR4 150 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 LAIR1Q6GTX8 287 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 LRRC55Q6ZSA7 311 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 MRGPRGQ86SM5 289 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 CCHCR1Q8TD31 782 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 MENTQ9BUN1 341 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 MRI1Q9BV20 369 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 SLITRK6Q9H5Y7 841 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 RUVBL1Q9Y265 456 aaKnown RBP6.5□□□□□ -1.37
PTPN4-212ENST00000488896 MAP3K2Q9Y2U5 619 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 CHST2Q9Y4C5 530 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 PNPLA7Q6ZV29 1317 aa6.5□□□□□ -1.37
PTPN4-212ENST00000488896 ATRNL1Q5VV63 1379 aa6.49□□□□□ -1.37
PTPN4-212ENST00000488896 DRGXA6NNA5 263 aa6.49□□□□□ -1.37
PTPN4-212ENST00000488896 ZSCAN20P17040 1043 aaPredicted RBP6.49□□□□□ -1.37
PTPN4-212ENST00000488896 KRT4P19013 534 aa6.49□□□□□ -1.37
PTPN4-212ENST00000488896 FPR1P21462 350 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms