RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 MIPOL1Q8TD10 442 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 HAUS1Q96CS2 278 aa17.25■□□□□ 0.35
MCF2L-229ENST00000488765 PITPNM2Q9BZ72 1349 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 A0A0J9YVX5 310 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 ASLP04424 464 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 ATP6V1B1P15313 513 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 PRDX5P30044 214 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 PTGIRP43119 386 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 COG7P83436 770 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 GUF1Q8N442 669 aaKnown RBP17.24■□□□□ 0.35
MCF2L-229ENST00000488765 RFWD2Q8NHY2 731 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 FNBP1Q96RU3 617 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 CENPKQ9BS16 269 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 GANQ9H2C0 597 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 USP21Q9UK80 565 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 COG5Q9UP83 839 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 MAGEB6P1A0A0J9YX57 407 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 CLIC2O15247 247 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 KRT15P19012 456 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 ECM1Q16610 540 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 SNX29Q8TEQ0 813 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 TUT1Q9H6E5 874 aaKnown RBP17.24■□□□□ 0.35
MCF2L-229ENST00000488765 ZNF180Q9UJW8 692 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 MINPP1Q9UNW1 487 aa17.24■□□□□ 0.35
MCF2L-229ENST00000488765 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.24■□□□□ 0.35
MCF2L-229ENST00000488765 TMCC1O94876 653 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 FGFR2P21802 821 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 RPA3P35244 121 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-229ENST00000488765 STRN3Q13033 797 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 KBTBD12Q3ZCT8 623 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 UNC13DQ70J99 1090 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 SCUBE1Q8IWY4 988 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 RNF168Q8IYW5 571 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-229ENST00000488765 NAT14Q8WUY8 206 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 LENG1Q96BZ8 264 aaPredicted RBP17.23■□□□□ 0.35
MCF2L-229ENST00000488765 CNOT7Q9UIV1 285 aaKnown RBP17.23■□□□□ 0.35
MCF2L-229ENST00000488765 HDAC9Q9UKV0 1011 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 ALG6Q9Y672 507 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 GSC2O15499 205 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 MARCH6O60337 910 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 NR2F2P24468 414 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 SKIV2L2P42285 1042 aaKnown RBP17.23■□□□□ 0.35
MCF2L-229ENST00000488765 PARP10Q53GL7 1025 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 SIKE1Q9BRV8 207 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 PCDHB13Q9Y5F0 798 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 RFC4P35249 363 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 CCR3P51677 355 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 SMC1BQ8NDV3 1235 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 AZIN2Q96A70 460 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 AAASQ9NRG9 546 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 HEY2Q9UBP5 337 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 DOLKQ9UPQ8 538 aa17.23■□□□□ 0.35
MCF2L-229ENST00000488765 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
MCF2L-229ENST00000488765 SPATA31A5Q5VU36 1347 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 SPATA31A7Q8IWB4 1347 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 CA4P22748 312 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 CETN2P41208 172 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 ADARP55265 1226 aaKnown RBP17.22■□□□□ 0.35
MCF2L-229ENST00000488765 RPS8P62241 208 aaKnown RBP17.22■□□□□ 0.35
MCF2L-229ENST00000488765 LRRC63Q05C16 580 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 MAP7Q14244 749 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 CLNKQ7Z7G1 428 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 SYCE1Q8N0S2 351 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 LNX1Q8TBB1 728 aaPredicted RBP17.22■□□□□ 0.35
MCF2L-229ENST00000488765 TMCO1Q9UM00 188 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 STX8Q9UNK0 236 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 DISP2A7MBM2 1401 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 STRCQ7RTU9 1775 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 DNAJC6O75061 913 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 CALML3P27482 149 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 YARSP54577 528 aaKnown RBP17.22■□□□□ 0.35
MCF2L-229ENST00000488765 OCRLQ01968 901 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 FAM182AQ5T1J6 154 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 LPCAT4Q643R3 524 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 TBCKQ8TEA7 893 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 ACP6Q9NPH0 428 aa17.22■□□□□ 0.35
MCF2L-229ENST00000488765 CES2O00748 559 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
MCF2L-229ENST00000488765 PON1P27169 355 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
MCF2L-229ENST00000488765 AP1B1Q10567 949 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 COASYQ13057 564 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 FAM26FQ5R3K3 315 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 MARK2Q7KZI7 788 aaKnown RBP17.21■□□□□ 0.35
MCF2L-229ENST00000488765 IWS1Q96ST2 819 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 E9PMD0 336 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 PAX3P23760 479 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 CASP4P49662 377 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 NAPAP54920 295 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 ZRSR2Q15696 482 aaKnown RBP17.21■□□□□ 0.35
MCF2L-229ENST00000488765 SLC1A5Q15758 541 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 TMEM63BQ5T3F8 832 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 PHLDB3Q6NSJ2 640 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 NSMFQ6X4W1 530 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 OTOAQ7RTW8 1153 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 VPS36Q86VN1 386 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 TRIM59Q8IWR1 403 aa17.21■□□□□ 0.35
MCF2L-229ENST00000488765 TAB3Q8N5C8 712 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms