RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 CCL23P55773 120 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 FPGSQ05932 587 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 POU5F1BQ06416 359 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 DNTTIP2Q5QJE6 756 aaKnown RBP13.81□□□□□ -0.2
NELFE-209ENST00000488426 FAM109BQ6ICB4 259 aaPredicted RBP13.81□□□□□ -0.2
NELFE-209ENST00000488426 PDXDC1Q6P996 788 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 TOGARAM2Q6ZUX3 1019 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 GPD1LQ8N335 351 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 TMC2Q8TDI7 906 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 KAT2BQ92831 832 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 FAM161BQ96MY7 647 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.22e-7■■□□□ 14.2
NELFE-209ENST00000488426 CCDC113Q9H0I3 377 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 PRDM4Q9UKN5 801 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 MYO6Q9UM54 1294 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 VCANP13611 3396 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 MROH7Q68CQ1 1323 aa13.81□□□□□ -0.2
NELFE-209ENST00000488426 TRIM49P0CI25 452 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 TRIM49CP0CI26 452 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 POLR2FP61218 127 aaKnown RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 MYL7Q01449 175 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 MTF1Q14872 753 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 PTPN14Q15678 1187 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 KLHDC7AQ5VTJ3 777 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 DPY19L2P1Q6NXN4 242 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 RRAGAQ7L523 313 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 CCDC170Q8IYT3 715 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 DEFB123Q8N688 67 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 LINC01465Q8N7H1 131 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 C16orf45Q96MC5 204 aaPredicted RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 MFSD14AQ96MC6 490 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 MTG1Q9BT17 334 aaPredicted RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 NFKBIZQ9BYH8 718 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 WNT8AQ9H1J5 351 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 ADGRG1Q9Y653 693 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 EVPLQ92817 2033 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 LRRC53A6NM62 1247 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 EXTL3O43909 919 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 LDHAP00338 332 aaKnown RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 F2P00734 622 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 ADRB2P07550 413 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 SLC9A1P19634 815 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 KLRC1P26715 233 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 TMOD1P28289 359 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 CYLC1P35663 651 aaPredicted RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 CETN1Q12798 172 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 PPFIA1Q13136 1202 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 MAPK6Q16659 721 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 RHPN2Q8IUC4 686 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 CBWD2Q8IUF1 395 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 REXO1L1PQ8IX06 675 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 METTL13Q8N6R0 699 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 RNF149Q8NC42 400 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 SCLYQ96I15 445 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 CHP1Q99653 195 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 MRPL4Q9BYD3 311 aaKnown RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 EPN1Q9Y6I3 576 aaPredicted RBP13.8□□□□□ -0.2
NELFE-209ENST00000488426 CHD9Q3L8U1 2897 aa13.8□□□□□ -0.2
NELFE-209ENST00000488426 KAT6AQ92794 2004 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 GOLGA8IPA6NC78 632 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 RRN3P2A6NIE6 340 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 GOLGA8JA6NMD2 632 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 GRXCR1A8MXD5 290 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 NDUFA10O95299 355 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 UCHL3P15374 230 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CLCN3P51790 818 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 IGBP1P78318 339 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CYP24A1Q07973 514 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CBWD6Q4V339 395 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 FAM47CQ5HY64 1035 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CBWD3Q5JTY5 395 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CBWD5Q5RIA9 395 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 TMEM240Q5SV17 173 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 PARD3BQ8TEW8 1205 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 HIPK3Q9H422 1215 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 SIX2Q9NPC8 291 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 NLRC4Q9NPP4 1024 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 CHD7Q9P2D1 2997 aa13.79□□□□□ -0.2
NELFE-209ENST00000488426 AGO2Q9UKV8 859 aaKnown RBP13.79□□□□□ -0.2
NELFE-209ENST00000488426 A0A0B4J269 797 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 ZNF233A6NK53 670 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 TNNT1P13805 278 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 RFX1P22670 979 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 GTF2H1P32780 548 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 PTENP60484 403 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 DLG4P78352 724 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 HIC1Q14526 733 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 GRIK4Q16099 956 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 C1orf220Q5T0J3 134 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 SFMBT2Q5VUG0 894 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 MTHFD1LQ6UB35 978 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 ZNF365Q70YC5 407 aa13.78□□□□□ -0.2
NELFE-209ENST00000488426 IFNLR1Q8IU57 520 aaPredicted RBP13.78□□□□□ -0.2
NELFE-209ENST00000488426 ZSWIM2Q8NEG5 633 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms