RNA–Protein interactions for RNA: ENST00000487997.1

PTBP3-208, Transcript of polypyrimidine tract binding protein 3, human

TSL 3

Gene PTBP3, Length 389 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTBP3-208	ENST00000487997	NOMO2	Q5JPE7	1267 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	CLLU1OS	Q5K130	101 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	UBXN11	Q5T124	520 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	ATF7IP2	Q5U623	682 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	ADAL	Q6DHV7	355 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	SHC4	Q6S5L8	630 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	MRPL10	Q7Z7H8	261 aa	Known RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	CDR2L	Q86X02	465 aa	Predicted RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	FAM178B	Q8IXR5	827 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	CEP57L1	Q8IYX8	460 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	MICALL1	Q8N3F8	863 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	SLC17A8	Q8NDX2	589 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	MAFA	Q8NHW3	353 aa	Predicted RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	GDPD5	Q8WTR4	605 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	LEO1	Q8WVC0	666 aa	Predicted RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	BICD1	Q96G01	975 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	CASD1	Q96PB1	797 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	TCHP	Q9BT92	498 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	EIF2A	Q9BY44	585 aa	Known RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	CCDC113	Q9H0I3	377 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	TYW1	Q9NV66	732 aa	Known RBP	10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	ARHGAP28	Q9P2N2	729 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	KANSL3	Q9P2N6	904 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	PARP2	Q9UGN5	583 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	IPP	Q9Y573	584 aa		10.46	□□□□□ -0.73
PTBP3-208	ENST00000487997	EPOP	A6NHQ4	379 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	C5orf67	F2Z3F1	127 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997		K7ENM7	598 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	OFD1	O75665	1012 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	GAP43	P17677	238 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	ALDH7A1	P49419	539 aa	Known RBP	10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	NCKAP1L	P55160	1127 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	DCAF4L1	Q3SXM0	396 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	RESP18	Q5W5W9	173 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	HAUS6	Q7Z4H7	955 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	SPRED2	Q7Z698	418 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	CCDC65	Q8IXS2	484 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	THNSL1	Q8IYQ7	743 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	LRRC15	Q8TF66	581 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	PPM1E	Q8WY54	764 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	P2RX5	Q93086	422 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZNF558	Q96NG5	402 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	RPS6KC1	Q96S38	1066 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	TNMD	Q9H2S6	317 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	PDZD7	Q9H5P4	517 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	MAGEF1	Q9HAY2	307 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	LMCD1	Q9NZU5	365 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	SEL1L	Q9UBV2	794 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	KCNH3	Q9ULD8	1083 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	GIT1	Q9Y2X7	761 aa		10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997	PRRC2B	Q5JSZ5	2229 aa	Known RBP	10.45	□□□□□ -0.74
PTBP3-208	ENST00000487997		A0A087X0B3	334 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	MYMK	A6NI61	221 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	MAPT	P10636	758 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	PRKCSH	P14314	528 aa	Predicted RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	CMA1	P23946	247 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	PPM1A	P35813	382 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZNF131	P52739	623 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	KRT17	Q04695	432 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ADGRE1	Q14246	886 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	CCDC85B	Q15834	202 aa	Predicted RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ZNF568	Q3ZCX4	644 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	HERC4	Q5GLZ8	1057 aa	Predicted RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	NT5DC1	Q5TFE4	455 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	KCNT2	Q6UVM3	1135 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	AGMO	Q6ZNB7	445 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	COLGALT1	Q8NBJ5	622 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	SMG8	Q8ND04	991 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	TMEM161B	Q8NDZ6	487 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	STAM	Q92783	540 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ACO2	Q99798	780 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	CCDC94	Q9BW85	323 aa	Predicted RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	TARS2	Q9BW92	718 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	SLC6A16	Q9GZN6	736 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	GBP3	Q9H0R5	595 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	LMAN2L	Q9H0V9	348 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	NXF3	Q9H4D5	531 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	CWH43	Q9H720	699 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	MRPL44	Q9H9J2	332 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	RNF19A	Q9NV58	838 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	PANK4	Q9NVE7	773 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	PUF60	Q9UHX1	559 aa	Known RBP	10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	TNFSF13B	Q9Y275	285 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	USP20	Q9Y2K6	914 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	HES2	Q9Y543	173 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	MTCH2	Q9Y6C9	303 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	CHD9	Q3L8U1	2897 aa		10.44	□□□□□ -0.74
PTBP3-208	ENST00000487997	ANK1	P16157	1881 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997		A0A1B0GVL5	298 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ARL5C	A6NH57	179 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	MEIS3P2	A8K0S8	358 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	NRG2	O14511	850 aa	Predicted RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	HNRNPDL	O14979	420 aa	Known RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	CLDN3	O15551	220 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	POMC	P01189	267 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	ALDH2	P05091	517 aa		10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	POU3F3	P20264	500 aa	Predicted RBP	10.43	□□□□□ -0.74
PTBP3-208	ENST00000487997	AKAP5	P24588	427 aa		10.43	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms