RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 ASLP04424 464 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 TM4SF1P30408 202 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 EPHX2P34913 555 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 MRE11P49959 708 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 MEOX1P50221 254 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 MECP2P51608 486 aaKnown RBP6.33□□□□□ -1.4
BRCA1-217ENST00000487825 KIF11P52732 1056 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 ARHGAP44Q17R89 818 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 HS1BP3Q53T59 392 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 SPDYAQ5MJ70 313 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 AGBL4Q5VU57 503 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 TMEM200BQ69YZ2 307 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 TRIM68Q6AZZ1 485 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 CC2D1AQ6P1N0 951 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-217ENST00000487825 OTOP1Q7RTM1 612 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 PNMA8AQ86V59 439 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-217ENST00000487825 CHST14Q8NCH0 376 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 CALML6Q8TD86 181 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 OR14A2Q96R54 314 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 ADOQ96SZ5 270 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 TAOK3Q9H2K8 898 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 TMOD3Q9NYL9 352 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 SRP68Q9UHB9 627 aaKnown RBP6.33□□□□□ -1.4
BRCA1-217ENST00000487825 HACL1Q9UJ83 578 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 NCAPD2Q15021 1401 aa6.33□□□□□ -1.4
BRCA1-217ENST00000487825 CARMIL3Q8ND23 1372 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 RANBP2P49792 3224 aaKnown RBP6.32□□□□□ -1.4
BRCA1-217ENST00000487825 PTPDC1A2A3K4 754 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 MATN2O00339 956 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 ASMTLO95671 621 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 SDSP20132 328 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 APEX1P27695 318 aaKnown RBP6.32□□□□□ -1.4
BRCA1-217ENST00000487825 PIK3R6Q5UE93 754 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 USP30Q70CQ3 517 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 RTN4RL1Q86UN2 441 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-217ENST00000487825 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 OR14K1Q8NGZ2 314 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 FOXRED1Q96CU9 486 aaPredicted RBP6.32□□□□□ -1.4
BRCA1-217ENST00000487825 PUF60Q9UHX1 559 aaKnown RBP6.32□□□□□ -1.4
BRCA1-217ENST00000487825 MAGEL2Q9UJ55 1249 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 SCN7AQ01118 1682 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 CEP290O15078 2479 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 KIF20BQ96Q89 1820 aa6.32□□□□□ -1.4
BRCA1-217ENST00000487825 TRAF5O00463 557 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 DVL2O14641 736 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 AMHP03971 560 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 JMJD7P0C870 316 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 AMPHP49418 695 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 NFYCQ13952 458 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 CST9Q5W186 159 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 C2CD5Q86YS7 1000 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 UBXN4Q92575 508 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 PLA2G12BQ9BX93 195 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 OR10A2Q9H208 303 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 PCIF1Q9H4Z3 704 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 PIF1Q9H611 641 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 CABP5Q9NP86 173 aa6.31□□□□□ -1.4
BRCA1-217ENST00000487825 RNF123Q5XPI4 1314 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 ZNF541Q9H0D2 1346 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 H0YIN7 160 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 RAD17O75943 681 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 FSHBP01225 129 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 COMTP21964 271 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 RGS3P49796 1198 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 ALDH6A1Q02252 535 aaKnown RBP6.3□□□□□ -1.4
BRCA1-217ENST00000487825 PABPC4Q13310 644 aaKnown RBP eCLIP6.3□□□□□ -1.4
BRCA1-217ENST00000487825 PRKD1Q15139 912 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-217ENST00000487825 C21orf62-AS1Q17RA5 79 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 CFHR4Q92496 578 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 SEMA4AQ9H3S1 761 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 TMEM260Q9NX78 707 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 SAGE1Q9NXZ1 904 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 A0A1W2PP64 1363 aa6.3□□□□□ -1.4
BRCA1-217ENST00000487825 H7C1D1 291 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 C6P13671 934 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 ACO1P21399 889 aaKnown RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 FLT3P36888 993 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 SLC6A3Q01959 620 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 MAP3K12Q12852 859 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 ADAM15Q13444 863 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 CFAP100Q494V2 611 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 UBE2R2Q712K3 238 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 CTU1Q7Z7A3 348 aaKnown RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 BCL6BQ8N143 479 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 KIAA1958Q8N8K9 716 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 FOXB1Q99853 325 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 VPS11Q9H270 941 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 ACSS2Q9NR19 701 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 TESMINQ9Y4I5 508 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 POLR2AP24928 1970 aaKnown RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 VCANP13611 3396 aa6.29□□□□□ -1.4
BRCA1-217ENST00000487825 KIAA0100Q14667 2235 aaKnown RBP6.29□□□□□ -1.4
BRCA1-217ENST00000487825 LAMA3Q16787 3333 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 AKAP8O43823 692 aaKnown RBP6.28□□□□□ -1.4
BRCA1-217ENST00000487825 PRLP01236 227 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 SLC9A1P19634 815 aa6.28□□□□□ -1.4
BRCA1-217ENST00000487825 PTX3P26022 381 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-217ENST00000487825 CRKLP46109 303 aaKnown RBP6.28□□□□□ -1.4
BRCA1-217ENST00000487825 FNTBP49356 437 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms