RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ISCUQ9H1K1 167 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PSD3Q9NYI0 1048 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 IP6K2Q9UHH9 426 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 A6NJR5 290 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 LRRIQ3A6PVS8 624 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 COMTP21964 271 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 HNRNPH3P31942 346 aaKnown RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 SLC1A1P43005 524 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 NBPF12Q5TAG4 269 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 MEI1Q5TIA1 1274 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 TRIM50Q86XT4 487 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 IFT122Q9HBG6 1241 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 RNF181Q9P0P0 153 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 TBK1Q9UHD2 729 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 A0A087WUV0 522 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 ZBTB39O15060 712 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PHF2O75151 1096 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PRKCBP05771 671 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 MAPTP10636 758 aaKnown RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 RFC5P40937 340 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF662Q6ZS27 426 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 C1orf186Q6ZWK4 172 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 CYP26B1Q9NR63 512 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 EXOC1LA0A1B0GW35 172 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 M0R2N6 131 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 CAPN9O14815 690 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 IL9RQ01113 521 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 PGM5Q15124 567 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 SHROOM1Q2M3G4 852 aaPredicted RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 ARHGEF18Q6ZSZ5 1173 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 C7orf31Q8N865 590 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 C1orf54Q8WWF1 131 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 ZWILCHQ9H900 591 aa12.6□□□□□ -0.39
TRA2B-214ENST00000487615 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
TRA2B-214ENST00000487615 EXTL3O43909 919 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 PRPSAP2O60256 369 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 SUN1O94901 812 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 KRT14P02533 472 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 PPP2R2AP63151 447 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 KCNA1Q09470 495 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 KCNMA1Q12791 1236 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 NCOA4Q13772 614 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 MXD4Q14582 209 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 BAP1Q92560 729 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 FAM149B1Q96BN6 582 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 SHISA4Q96DD7 197 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 ZIM3Q96PE6 472 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 MED10Q9BTT4 135 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 ELP3Q9H9T3 547 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 PARVAQ9NVD7 372 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 GTF3C4Q9UKN8 822 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 ATMINO43313 823 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 YWHAGP61981 247 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 BASP1P80723 227 aaKnown RBP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 ADCY1Q08828 1119 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 TMED2Q15363 201 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 FAM47CQ5HY64 1035 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 BSPRYQ5W0U4 402 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 DDX42Q86XP3 938 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 SH2D3CQ8N5H7 860 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 TARS2Q9BW92 718 aaKnown RBP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 ZNF446Q9NWS9 450 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 OATP04181 439 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 SPATA31C1P0DKV0 1188 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 TROVE2P10155 538 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 PROCA1Q8NCQ7 364 aaPredicted RBP12.59□□□□□ -0.39
TRA2B-214ENST00000487615 CPA5Q8WXQ8 436 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 PI4K2AQ9BTU6 479 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 WDR18Q9BV38 432 aa12.59□□□□□ -0.39
TRA2B-214ENST00000487615 TXNP10599 105 aaKnown RBP12.58□□□□□ -0.39
TRA2B-214ENST00000487615 CENPUQ71F23 418 aa12.58□□□□□ -0.39
TRA2B-214ENST00000487615 FASTKD5Q7L8L6 764 aaKnown RBP12.58□□□□□ -0.39
TRA2B-214ENST00000487615 CATSPER4Q7RTX7 472 aa12.58□□□□□ -0.39
TRA2B-214ENST00000487615 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.39
TRA2B-214ENST00000487615 REXO2Q9Y3B8 237 aaKnown RBP12.58□□□□□ -0.39
TRA2B-214ENST00000487615 SIPA1L3O60292 1781 aaPredicted RBP12.58□□□□□ -0.39
TRA2B-214ENST00000487615 RCCD1A6NED2 376 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 I3L4J1 428 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 MYO1CO00159 1063 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 CELF4Q9BZC1 486 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 KCTD10Q9H3F6 313 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 SNED1Q8TER0 1413 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 SASH3O75995 380 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ABL1P00519 1130 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 MKRN3Q13064 507 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ZKSCAN8Q15776 578 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 APTXQ7Z2E3 356 aaKnown RBP12.58□□□□□ -0.4
TRA2B-214ENST00000487615 JAMLQ86YT9 394 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 CREG2Q8IUH2 290 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 ACTRT1Q8TDG2 376 aa12.58□□□□□ -0.4
TRA2B-214ENST00000487615 LRRC8CQ8TDW0 803 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms