RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 TIGD1Q96MW7 591 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 STRA6Q9BX79 667 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 GOLPH3LQ9H4A5 285 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 CWH43Q9H720 699 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 PLEKHA5Q9HAU0 1116 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 SNTG2Q9NY99 539 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 PTPRSQ13332 1948 aa16■□□□□ 0.15
LIMS3-205ENST00000487150 GOLGA6L22H0YM25 854 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 ABLIM1O14639 778 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 OGTO15294 1046 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 FGF18O76093 207 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 THP07101 528 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 AKAP5P24588 427 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 BCAR1P56945 870 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 PLCB3Q01970 1234 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 ZC2HC1CQ53FD0 456 aaPredicted RBP15.99■□□□□ 0.15
LIMS3-205ENST00000487150 CLEC17AQ6ZS10 378 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 HS2ST1Q7LGA3 356 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 ZBTB33Q86T24 672 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 GOLGA5Q8TBA6 731 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 MSTO1Q9BUK6 570 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 BLZF1Q9H2G9 400 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 RMND1Q9NWS8 449 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 TBC1D7Q9P0N9 293 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 CGNQ9P2M7 1197 aaKnown RBP15.99■□□□□ 0.15
LIMS3-205ENST00000487150 GDAQ9Y2T3 454 aa15.99■□□□□ 0.15
LIMS3-205ENST00000487150 A0A0B4J269 797 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 MEIS3P2A8K0S8 358 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 XPOTO43592 962 aaKnown RBP15.98■□□□□ 0.15
LIMS3-205ENST00000487150 SMC2O95347 1197 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
LIMS3-205ENST00000487150 POMCP01189 267 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 ALDH2P05091 517 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 HARSP12081 509 aaKnown RBP15.98■□□□□ 0.15
LIMS3-205ENST00000487150 SCNN1GP51170 649 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 EHHADHQ08426 723 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 CUL4BQ13620 913 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 LRRC55Q6ZSA7 311 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 CD302Q8IX05 232 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 ELOA2Q8IYF1 753 aaPredicted RBP15.98■□□□□ 0.15
LIMS3-205ENST00000487150 KLHL23Q8NBE8 558 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 POMGNT1Q8WZA1 660 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 SNX27Q96L92 541 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 ZFP42Q96MM3 310 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 UROC1Q96N76 676 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 GBP3Q9H0R5 595 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 RNF39Q9H2S5 420 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 PLAGL2Q9UPG8 496 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 STYXL1Q9Y6J8 313 aa15.98■□□□□ 0.15
LIMS3-205ENST00000487150 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.97■□□□□ 0.15
LIMS3-205ENST00000487150 EPOPA6NHQ4 379 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 RPN1P04843 607 aaKnown RBP15.97■□□□□ 0.15
LIMS3-205ENST00000487150 MYBP10242 640 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 GARTP22102 1010 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 PPP2R3AQ06190 1150 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 DSC1Q08554 894 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 TUSC3Q13454 348 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 KCNB1Q14721 858 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 TPRNQ4KMQ1 711 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 SLC39A11Q8N1S5 342 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 MAFAQ8NHW3 353 aaPredicted RBP15.97■□□□□ 0.15
LIMS3-205ENST00000487150 NRDE2Q9H7Z3 1164 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 RPF1Q9H9Y2 349 aaKnown RBP15.97■□□□□ 0.15
LIMS3-205ENST00000487150 CNTN3Q9P232 1028 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 USP20Q9Y2K6 914 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 FAN1Q9Y2M0 1017 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 SZT2Q5T011 3432 aa15.97■□□□□ 0.15
LIMS3-205ENST00000487150 CDH23Q9H251 3354 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 NCK2O43639 380 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 LPXNO60711 386 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 RHOBTB3O94955 611 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 ITGB1P05556 798 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 GALTP07902 379 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 KCNE1P15382 129 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 CASP5P51878 434 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 DPYDQ12882 1025 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 BMT2Q1RMZ1 405 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 XKR4Q5GH76 650 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 ARMCX5Q6P1M9 558 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 GRAMD1CQ8IYS0 662 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 ENGASEQ8NFI3 743 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 COLEC11Q9BWP8 271 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 NSUN3Q9H649 340 aaKnown RBP15.96■□□□□ 0.15
LIMS3-205ENST00000487150 KIAA1586Q9HCI6 787 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 NGRNQ9NPE2 291 aaKnown RBP15.96■□□□□ 0.15
LIMS3-205ENST00000487150 TLR9Q9NR96 1032 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 KLK14Q9P0G3 267 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 AGO2Q9UKV8 859 aaKnown RBP15.96■□□□□ 0.15
LIMS3-205ENST00000487150 MTCH2Q9Y6C9 303 aa15.96■□□□□ 0.15
LIMS3-205ENST00000487150 RALGAPA2Q2PPJ7 1873 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 GBF1Q92538 1859 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 RBAK-RBAKDNI3L0D1 243 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 OR1G1P47890 313 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 SLC11A1P49279 550 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 OSTNP61366 133 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 ELAVL2Q12926 359 aaKnown RBP15.95■□□□□ 0.14
LIMS3-205ENST00000487150 SNW1Q13573 536 aaKnown RBP15.95■□□□□ 0.14
LIMS3-205ENST00000487150 ADGRE1Q14246 886 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 KMT5BQ4FZB7 885 aa15.95■□□□□ 0.14
LIMS3-205ENST00000487150 EPM2AIP1Q7L775 607 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms