RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 MISP3Q96FF7 219 aa7.73□□□□□ -1.17
SMC4-217ENST00000485867 STRBPQ96SI9 672 aaKnown RBP7.73□□□□□ -1.17
SMC4-217ENST00000485867 BOLA2Q9H3K6 86 aa7.73□□□□□ -1.17
SMC4-217ENST00000485867 ZNF287Q9HBT7 754 aa7.73□□□□□ -1.17
SMC4-217ENST00000485867 EPB41L4AQ9HCS5 686 aaPredicted RBP7.73□□□□□ -1.17
SMC4-217ENST00000485867 PLAGL2Q9UPG8 496 aa7.73□□□□□ -1.17
SMC4-217ENST00000485867 LOXHD1Q8IVV2 1947 aa7.73□□□□□ -1.17
SMC4-217ENST00000485867 FASNP49327 2511 aaKnown RBP7.73□□□□□ -1.17
SMC4-217ENST00000485867 KRTAP4-8A0A0G2JLE6 195 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 PNMA6FA0A0J9YX94 578 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 ANP32CO43423 234 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 RNGTTO60942 597 aaKnown RBP7.72□□□□□ -1.17
SMC4-217ENST00000485867 LEFTY1O75610 366 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 ITGB1P05556 798 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 CTSHP09668 335 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 TSPY3P0CV98 308 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 TSPY8P0CW00 308 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 ZNF252P-AS1Q0IIN9 211 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 BNIP3Q12983 259 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 DHX37Q8IY37 1157 aaKnown RBP7.72□□□□□ -1.17
SMC4-217ENST00000485867 UBALD2Q8IYN6 164 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 KIAA2013Q8IYS2 634 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 C3orf58Q8NDZ4 430 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 VN1R2Q8NFZ6 395 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 FRAT1Q92837 279 aaPredicted RBP7.72□□□□□ -1.17
SMC4-217ENST00000485867 P2RX5Q93086 422 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 ISL2Q96A47 359 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 HAUS7Q99871 368 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 DUSP23Q9BVJ7 150 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 CACNA2D2Q9NY47 1150 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 PCOLCE2Q9UKZ9 415 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 DOCK5Q9H7D0 1870 aa7.72□□□□□ -1.17
SMC4-217ENST00000485867 B4DLN1 442 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 CAND2O75155 1236 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 PAPLNO95428 1278 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 BRD1O95696 1058 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 IFIT2P09913 472 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 NME2P22392 152 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 HOXC8P31273 242 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 SLC16A2P36021 539 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 TDO2P48775 406 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 MRPL12P52815 198 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 RBM10P98175 930 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 TFAP4Q01664 338 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 BTG3Q14201 252 aaPredicted RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 PLCL1Q15111 1095 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 CCDC96Q2M329 555 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 SYDE2Q5VT97 1194 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 CWF19L1Q69YN2 538 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 TTBK2Q6IQ55 1244 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 CEP85Q6P2H3 762 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 BTNL9Q6UXG8 535 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 SEPT14Q6ZU15 432 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 RBM23Q86U06 439 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 CLASRPQ8N2M8 674 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 PPTC7Q8NI37 304 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 SPPL3Q8TCT6 385 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 ATP8B4Q8TF62 1192 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 APBB2Q92870 758 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 ZNF689Q96CS4 500 aaPredicted RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 SMOC2Q9H3U7 446 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 DLL3Q9NYJ7 618 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 SORCS3Q9UPU3 1222 aa7.71□□□□□ -1.18
SMC4-217ENST00000485867 MRPL42Q9Y6G3 142 aaKnown RBP7.71□□□□□ -1.18
SMC4-217ENST00000485867 FNDC1Q4ZHG4 1894 aaPredicted RBP7.7□□□□□ -1.18
SMC4-217ENST00000485867 CACNA1IQ9P0X4 2223 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 ATP5JP18859 108 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 SP100P23497 879 aaPredicted RBP7.7□□□□□ -1.18
SMC4-217ENST00000485867 CLCN5P51795 746 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 PLCB3Q01970 1234 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 ST3GAL2Q16842 350 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 NAALADL2Q58DX5 795 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 HSP90AB4PQ58FF6 505 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 ZSCAN25Q6NSZ9 544 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 POU5F2Q8N7G0 328 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 RNF214Q8ND24 703 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 GPBAR1Q8TDU6 330 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 DCAF4Q8WV16 495 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 POF1BQ8WVV4 589 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 ATP6V0A1Q93050 837 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 S1PR5Q9H228 398 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 DDX41Q9UJV9 622 aaKnown RBP7.7□□□□□ -1.18
SMC4-217ENST00000485867 STX8Q9UNK0 236 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 WDR19Q8NEZ3 1342 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 DENND4AQ7Z401 1863 aa7.7□□□□□ -1.18
SMC4-217ENST00000485867 C17orf102A2RUQ5 167 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 PER2O15055 1255 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 GPAA1O43292 621 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 NMT2O60551 498 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 DGKIO75912 1065 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 LMNAP02545 664 aaKnown RBP7.69□□□□□ -1.18
SMC4-217ENST00000485867 ARP10275 920 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 CD8BP10966 210 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 FUT4P22083 530 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 OXCT1P55809 520 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 ANGPT1Q15389 498 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 CCDC105Q8IYK2 499 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 CMTR2Q8IYT2 770 aaKnown RBP7.69□□□□□ -1.18
SMC4-217ENST00000485867 KCNG4Q8TDN1 519 aa7.69□□□□□ -1.18
SMC4-217ENST00000485867 OSBP2Q969R2 916 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms