RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 CSPG5O95196 566 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 LAG3P18627 525 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 GRM5P41594 1212 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 YARSP54577 528 aaKnown RBP12.95□□□□□ -0.34
HPS4-214ENST00000485842 UBE2HP62256 183 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 MCL1Q07820 350 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 EHHADHQ08426 723 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 DPYDQ12882 1025 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 GPM6BQ13491 265 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 PNOCQ13519 176 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 COLGALT1Q8NBJ5 622 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 RSPH1Q8WYR4 309 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 CCDC47Q96A33 483 aaKnown RBP12.95□□□□□ -0.34
HPS4-214ENST00000485842 ZNF558Q96NG5 402 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 GBP4Q96PP9 640 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
HPS4-214ENST00000485842 MSTO1Q9BUK6 570 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 HAPLN2Q9GZV7 340 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 AAASQ9NRG9 546 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 PCDHB12Q9Y5F1 795 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 CITO14578 2027 aa12.95□□□□□ -0.34
HPS4-214ENST00000485842 TRIP11Q15643 1979 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 EIF3DO15371 548 aaKnown RBP eCLIP12.94□□□□□ -0.34
HPS4-214ENST00000485842 B4GALT3O60512 393 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 IGFBP4P22692 258 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 GLRA4Q5JXX5 417 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 KCNT2Q6UVM3 1135 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 CLEC17AQ6ZS10 378 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 NOC3LQ8WTT2 800 aaKnown RBP12.94□□□□□ -0.34
HPS4-214ENST00000485842 POMGNT1Q8WZA1 660 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 ERCC4Q92889 916 aaPredicted RBP12.94□□□□□ -0.34
HPS4-214ENST00000485842 FAM193BQ96PV7 902 aaPredicted RBP12.94□□□□□ -0.34
HPS4-214ENST00000485842 C11orf84Q9BUA3 381 aaPredicted RBP12.94□□□□□ -0.34
HPS4-214ENST00000485842 CXCL16Q9H2A7 254 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 NRDE2Q9H7Z3 1164 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 TOPORSQ9NS56 1045 aaPredicted RBP12.94□□□□□ -0.34
HPS4-214ENST00000485842 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 KANSL3Q9P2N6 904 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 DNAJB4Q9UDY4 337 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 ZMYM2Q9UBW7 1377 aa12.94□□□□□ -0.34
HPS4-214ENST00000485842 PLXNA4Q9HCM2 1894 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 UBE4BO95155 1302 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 A0A0B4J269 797 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 NT5C1B-RDH14C9J2C7 533 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 C5orf67F2Z3F1 127 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 PTGESO14684 152 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 OGTO15294 1046 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 INPPL1O15357 1258 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 DDHD2O94830 711 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 RB1P06400 928 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 FOSL2P15408 326 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 TNFSF9P41273 254 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 BCAR1P56945 870 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 GRIK3Q13003 919 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 ZBTB41Q5SVQ8 909 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 SLFN12LQ6IEE8 588 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 EPM2AIP1Q7L775 607 aaPredicted RBP12.93□□□□□ -0.34
HPS4-214ENST00000485842 KLHL23Q8NBE8 558 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 KIAA0895Q8NCT3 520 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 SNX27Q96L92 541 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 TIGD1Q96MW7 591 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 ACAP3Q96P50 834 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 TMEM206Q9H813 350 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 ALG13Q9NP73 1137 aaKnown RBP12.93□□□□□ -0.34
HPS4-214ENST00000485842 HOOK1Q9UJC3 728 aaKnown RBP12.93□□□□□ -0.34
HPS4-214ENST00000485842 PLAGL2Q9UPG8 496 aa12.93□□□□□ -0.34
HPS4-214ENST00000485842 H3BNC9 293 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 TULP1O00294 542 aaPredicted RBP12.92□□□□□ -0.34
HPS4-214ENST00000485842 GRM6O15303 877 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 LPXNO60711 386 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 ITGB1P05556 798 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 CLTAP09496 248 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 CXCL8P10145 99 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 HOXD13P35453 343 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 PPM1AP35813 382 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 OR1G1P47890 313 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 SLC11A1P49279 550 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 ALDH7A1P49419 539 aaKnown RBP12.92□□□□□ -0.34
HPS4-214ENST00000485842 STK4Q13043 487 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 PSMD2Q13200 908 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 MAPK8IP2Q13387 824 aaPredicted RBP12.92□□□□□ -0.34
HPS4-214ENST00000485842 ARMCX5Q6P1M9 558 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 MICALL1Q8N3F8 863 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 GSTCDQ8NEC7 633 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 SCFD1Q8WVM8 642 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 P2RX5Q93086 422 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 SAAL1Q96ER3 474 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 SPG21Q9NZD8 308 aa12.92□□□□□ -0.34
HPS4-214ENST00000485842 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
HPS4-214ENST00000485842 PRG3Q9Y2Y8 225 aaPredicted RBP12.92□□□□□ -0.34
HPS4-214ENST00000485842 PDCD11Q14690 1871 aaKnown RBP12.91□□□□□ -0.34
HPS4-214ENST00000485842 CHD7Q9P2D1 2997 aa12.91□□□□□ -0.34
HPS4-214ENST00000485842 CASTOR2A6NHX0 329 aa12.91□□□□□ -0.34
HPS4-214ENST00000485842 GOLGA6L22H0YM25 854 aa12.91□□□□□ -0.34
HPS4-214ENST00000485842 FGF18O76093 207 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms