RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 FERMT2Q96AC1 680 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 FAM81BQ96LP2 452 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 FAM193BQ96PV7 902 aaPredicted RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 TAAR9Q96RI9 348 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 MAK16Q9BXY0 300 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 LMAN2LQ9H0V9 348 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 FAM204AQ9H8W3 233 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 IPPKQ9H8X2 491 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 FANCFQ9NPI8 374 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 TMOD4Q9NZQ9 345 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 SLAMF8Q9P0V8 285 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 NFKBIL1Q9UBC1 381 aaPredicted RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 CLIP2Q9UDT6 1046 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 DDX20Q9UHI6 824 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 NOC2LQ9Y3T9 749 aaKnown RBP5.03□□□□□ -1.6
RTN4-213ENST00000485749 PAXBP1Q9Y5B6 917 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 MROH2BQ7Z745 1585 aa5.03□□□□□ -1.6
RTN4-213ENST00000485749 SLC12A8A0AV02 714 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 FSD2A1L4K1 749 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 GOLGA8AA7E2F4 631 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 GOLGA8BA8MQT2 603 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ELL2O00472 640 aaPredicted RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 XPOTO43592 962 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 MYO1BO43795 1136 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 NUAK1O60285 661 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 MAFKO60675 156 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 DKC1O60832 514 aaKnown RBP eCLIP5.02□□□□□ -1.61
RTN4-213ENST00000485749 TBCAO75347 108 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 CBX7O95931 251 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 CD4P01730 458 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ZBTB48P10074 688 aaPredicted RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 RPS2P15880 293 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 PAMP19021 973 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ENDOUP21128 410 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 ENPP1P22413 925 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 RDXP35241 583 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 GRK6P43250 576 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 LIMK1P53667 647 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 USP14P54578 494 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ADKP55263 362 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 SCAND1P57086 179 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 MPP1Q00013 466 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 EIF4A2Q14240 407 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 PLBD1Q6P4A8 553 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 FRMD7Q6ZUT3 714 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 KDELC2Q7Z4H8 507 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 CCDC91Q7Z6B0 441 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 MILR1Q7Z6M3 343 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 VSIG1Q86XK7 387 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 GALNT13Q8IUC8 556 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ZZZ3Q8IYH5 903 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 LILRA2Q8N149 483 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 OXR1Q8N573 874 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 RUFY2Q8WXA3 655 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 RTF1Q92541 710 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 ZNF75CPQ92670 426 aaPredicted RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 CFAP36Q96G28 342 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 CLMNQ96JQ2 1002 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 TEKT5Q96M29 485 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 LRGUKQ96M69 825 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ADPGKQ9BRR6 497 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 TACO1Q9BSH4 297 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 ISCA1Q9BUE6 129 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 LSM14BQ9BX40 385 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 SLC12A9Q9BXP2 914 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 HDAC8Q9BY41 377 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ZDHHC5Q9C0B5 715 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 MYLK2Q9H1R3 596 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ELAC1Q9H777 363 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 GRPEL1Q9HAV7 217 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 CD320Q9NPF0 282 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 PAPOLBQ9NRJ5 636 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 TRMT13Q9NUP7 481 aaKnown RBP5.02□□□□□ -1.61
RTN4-213ENST00000485749 ABCF3Q9NUQ8 709 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 C19orf73Q9NVV2 129 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 AIPL1Q9NZN9 384 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 ZSWIM5Q9P217 1185 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 LRCH1Q9Y2L9 728 aa5.02□□□□□ -1.61
RTN4-213ENST00000485749 RASA4BC9J798 803 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 AP1G1O43747 822 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 CLASP2O75122 1294 aaKnown RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 TADA3O75528 432 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 SLC4A1P02730 911 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 APOA4P06727 396 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 LCP1P13796 627 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 IFNGR1P15260 489 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 VAV1P15498 845 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 ZKSCAN1P17029 563 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 XPAP23025 273 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 TMOD1P28289 359 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 ELF1P32519 619 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 GRK3P35626 688 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 STAT1P42224 750 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 TNNT3P45378 269 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 ALDH5A1P51649 535 aaPredicted RBP5.01□□□□□ -1.61
RTN4-213ENST00000485749 CTSWP56202 376 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 PPFIA1Q13136 1202 aa5.01□□□□□ -1.61
RTN4-213ENST00000485749 LSAMPQ13449 338 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms