RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 APBB1IPQ7Z5R6 666 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 SPRED2Q7Z698 418 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 GUF1Q8N442 669 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 SP7Q8TDD2 431 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 LRCH3Q96II8 777 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 KCTD10Q9H3F6 313 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 AGPAT3Q9NRZ7 376 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 MIOSQ9NXC5 875 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 TMEM63CQ9P1W3 806 aa16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 AGO2Q9UKV8 859 aaKnown RBP16.91■□□□□ 0.3
RPUSD3-217ENST00000485705 CHD9Q3L8U1 2897 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 GOLGA8IPA6NC78 632 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 ARL5CA6NH57 179 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 GOLGA8JA6NMD2 632 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 OGTO15294 1046 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 HOXA2O43364 376 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 CD44P16070 742 aaKnown RBP16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 DNAJB2P25686 324 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 ACOT2P49753 483 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 BTG3Q14201 252 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 RAB30Q15771 203 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 NOMO2Q5JPE7 1267 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 ARMCX5Q6P1M9 558 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 GLB1LQ6UWU2 654 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 ABI1Q8IZP0 508 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 GSTCDQ8NEC7 633 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 SAAL1Q96ER3 474 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 ACAP3Q96P50 834 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 CCDC94Q9BW85 323 aaPredicted RBP16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 MSRAQ9UJ68 235 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 GIT1Q9Y2X7 761 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 MYO7AQ13402 2215 aa16.9■□□□□ 0.3
RPUSD3-217ENST00000485705 SZT2Q5T011 3432 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 RALGAPA2Q2PPJ7 1873 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 LINC01553A4QN01 128 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 POMCP01189 267 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 CXCL8P10145 99 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 GARTP22102 1010 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 SCNN1GP51170 649 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 HS2ST1Q7LGA3 356 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 CMTR2Q8IYT2 770 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 TIFAQ96CG3 184 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 SEMA6BQ9H3T3 888 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 TYW1Q9NV66 732 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 PLAGL2Q9UPG8 496 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 MRPL42Q9Y6G3 142 aaKnown RBP16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 CDH23Q9H251 3354 aa16.89■□□□□ 0.29
RPUSD3-217ENST00000485705 PPP1R3GB7ZBB8 358 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 PTGESO14684 152 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 INPPL1O15357 1258 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 B4GALT3O60512 393 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 CLTAP09496 248 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 LINC00271P0C7V0 271 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 TAP1Q03518 808 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 NFKBIBQ15653 356 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 ENOX2Q16206 610 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 GLRA4Q5JXX5 417 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 CCDC183Q5T5S1 534 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 CAVIN1Q6NZI2 390 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 RBM43Q6ZSC3 357 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 ADSSL1Q8N142 457 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 FIBCD1Q8N539 461 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 NOC3LQ8WTT2 800 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 FAM213AQ9BRX8 229 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 CWH43Q9H720 699 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 UBN1Q9NPG3 1134 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 TBC1D13Q9NVG8 400 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 CPSF3Q9UKF6 684 aaKnown RBP16.88■□□□□ 0.29
RPUSD3-217ENST00000485705 PDXKO00764 312 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 DDHD2O94830 711 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 CYP2J2P51589 502 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 PMS1P54277 932 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 YARSP54577 528 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 WNT7BP56706 349 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 SNRPFP62306 86 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 KLHL10Q6JEL2 608 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 ALKAL1Q6UXT8 129 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 ZNF280BQ86YH2 543 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 C12orf56Q8IXR9 622 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 URGCPQ8TCY9 931 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 SNX27Q96L92 541 aa16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 ZMAT2Q96NC0 199 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 RPF1Q9H9Y2 349 aaKnown RBP16.87■□□□□ 0.29
RPUSD3-217ENST00000485705 TTC26A0AVF1 554 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 TRIM49BA6NDI0 452 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 LACTBL1A8MY62 500 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 EXTL3O43909 919 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 KIF20AO95235 890 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 SPAG1Q07617 926 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 ZCWPW2Q504Y3 356 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 XKR4Q5GH76 650 aa16.86■□□□□ 0.29
RPUSD3-217ENST00000485705 PPP2R2DQ66LE6 453 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms