RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	CCDC83	Q8IWF9	413 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	SUMF1	Q8NBK3	374 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	SMG8	Q8ND04	991 aa	Known RBP	11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	GPR152	Q8TDT2	470 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	KLHL5	Q96PQ7	755 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	MTMR9	Q96QG7	549 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	VN1R3	Q9BXE9	311 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	FAN1	Q9Y2M0	1017 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	IPP	Q9Y573	584 aa		11.75	□□□□□ -0.53
HMGN1-215	ENST00000485550	NRP1	O14786	923 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	GAS2	O43903	313 aa	Known RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	TSPAN1	O60635	241 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	USO1	O60763	962 aa	Known RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	NCL	P19338	710 aa	Known RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	GLRA2	P23416	452 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	RARRES1	P49788	294 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	CLCN4	P51793	760 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	PTEN	P60484	403 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	MMRN1	Q13201	1228 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	CAPS	Q13938	189 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	TFDP1	Q14186	410 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	MXD4	Q14582	209 aa	Predicted RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	ZNF174	Q15697	407 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	ERICH6B	Q5W0A0	696 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	C1orf210	Q8IVY1	113 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	SLC44A3	Q8N4M1	653 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	ST13P5	Q8NFI4	369 aa	Predicted RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	HS3ST6	Q96QI5	342 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	FOXQ1	Q9C009	403 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	GPRC5C	Q9NQ84	441 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	ANKEF1	Q9NU02	776 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	MIOS	Q9NXC5	875 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	DLGAP2	Q9P1A6	1054 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	PRG3	Q9Y2Y8	225 aa	Predicted RBP	11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	SIT1	Q9Y3P8	196 aa		11.74	□□□□□ -0.53
HMGN1-215	ENST00000485550	C2CD2L	O14523	706 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	B4GALT5	O43286	388 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	LRRN2	O75325	713 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	DGAT1	O75907	488 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	LYPLA2	O95372	231 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	CNP	P09543	421 aa	Known RBP	11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	SPATA31C1	P0DKV0	1188 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	GLUL	P15104	373 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	ARL2	P36404	184 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	OR1G1	P47890	313 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	SCNN1G	P51170	649 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	ATXN1	P54253	815 aa	Known RBP	11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	MBTD1	Q05BQ5	628 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	NCBP1	Q09161	790 aa	Known RBP	11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	SAFB	Q15424	915 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	NOTUM	Q6P988	496 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	C15orf39	Q6ZRI6	1047 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	TAS1R1	Q7RTX1	841 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	RSPH1	Q8WYR4	309 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	ZFP42	Q96MM3	310 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	MYADM	Q96S97	322 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	GAD1	Q99259	594 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	EMILIN2	Q9BXX0	1053 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	MAN1C1	Q9NR34	630 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	ARHGEF3	Q9NR81	526 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	KANSL3	Q9P2N6	904 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	NCDN	Q9UBB6	729 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	LIMCH1	Q9UPQ0	1083 aa		11.73	□□□□□ -0.53
HMGN1-215	ENST00000485550	CNOT1	A5YKK6	2376 aa	Known RBP	11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CLUH	O75153	1309 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CNTNAP2	Q9UHC6	1331 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	USP24	Q9UPU5	2620 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CCDC195	A0A1B0GUA6	201 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	ARL5C	A6NH57	179 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550		F8W810	466 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	KIN	O60870	393 aa	Known RBP	11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	MED24	O75448	989 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	SRF	P11831	508 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	ARF4	P18085	180 aa	Predicted RBP	11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	AKAP5	P24588	427 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	MLH1	P40692	756 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	AMHR2	Q16671	573 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	PHLDB3	Q6NSJ2	640 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CATSPER3	Q86XQ3	398 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CNNM3	Q8NE01	707 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	RABGGTA	Q92696	567 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	C8orf76	Q96K31	380 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	TMEM175	Q9BSA9	504 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	TRIM6	Q9C030	488 aa	Predicted RBP	11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	CSRNP2	Q9H175	543 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	POLD4	Q9HCU8	107 aa		11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	WDR6	Q9NNW5	1121 aa	Known RBP	11.72	□□□□□ -0.53
HMGN1-215	ENST00000485550	BAHCC1	Q9P281	2608 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	LRRIQ4	A6NIV6	560 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	INPPL1	O15357	1258 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	EIF5B	O60841	1220 aa	Known RBP	11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	RFPL2	O75678	378 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	NPTXR	O95502	500 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	LIG1	P18858	919 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	AXL	P30530	894 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	POU5F1B	Q06416	359 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	GNL2	Q13823	731 aa	Known RBP	11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	ST3GAL2	Q16842	350 aa		11.71	□□□□□ -0.53
HMGN1-215	ENST00000485550	VARS2	Q5ST30	1063 aa	Known RBP	11.71	□□□□□ -0.53

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