RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 A0A1W2PQC6 194 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 ZNF233A6NK53 670 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 RNF225M0QZC1 329 aaPredicted RBP15.81■□□□□ 0.12
LRIF1-202ENST00000485275 KIAA0391O15091 583 aaKnown RBP15.81■□□□□ 0.12
LRIF1-202ENST00000485275 TPM3P06753 285 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 MCF2P10911 925 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 RBL2Q08999 1139 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 ENOX2Q16206 610 aaKnown RBP15.81■□□□□ 0.12
LRIF1-202ENST00000485275 TRIM60Q495X7 471 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 SPECC1LQ69YQ0 1117 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 SCARA3Q6AZY7 606 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 BRSK2Q8IWQ3 736 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 ZNF710Q8N1W2 664 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 CRACR2AQ9BSW2 395 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 CXCL16Q9H2A7 254 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 ST3GAL5Q9UNP4 418 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 ITIH6Q6UXX5 1313 aa15.81■□□□□ 0.12
LRIF1-202ENST00000485275 RPS6KA5O75582 802 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 NPTXRO95502 500 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 GYPCP04921 128 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 CXCL8P10145 99 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 GCLMP48507 274 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 FMO5P49326 533 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 GPNMBQ14956 572 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 PSMD6Q15008 389 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 PCBP1Q15365 356 aaKnown RBP eCLIP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 ANKRD33Q7Z3H0 272 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 DRC7Q8IY82 874 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TMEM130Q8N3G9 435 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 ZNF516Q92618 1163 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 PAWRQ96IZ0 340 aaKnown RBP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TTYH3Q9C0H2 523 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 NXF3Q9H4D5 531 aaKnown RBP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 KIAA1586Q9HCI6 787 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 ERVK-5Q9HDB9 667 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 PCDH10Q9P2E7 1040 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 HES2Q9Y543 173 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 SCN5AQ14524 2016 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TRIP11Q15643 1979 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 CITO14578 2027 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 MGEA5O60502 916 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 LDHAP00338 332 aaKnown RBP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 RPLP2P05387 115 aaKnown RBP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 STAG3L1P0CL83 205 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 DLATP10515 647 aaKnown RBP15.8■□□□□ 0.12
LRIF1-202ENST00000485275 KRT13P13646 458 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 CD52P31358 61 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 CLDN10P78369 228 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 NOTUMQ6P988 496 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 SLC27A1Q6PCB7 646 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TMC2Q8TDI7 906 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TMEM117Q9H0C3 514 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 TMX1Q9H3N1 280 aa15.8■□□□□ 0.12
LRIF1-202ENST00000485275 PDCD11Q14690 1871 aaKnown RBP15.79■□□□□ 0.12
LRIF1-202ENST00000485275 CAND2O75155 1236 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 TPM2P07951 284 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 PPP2R3AQ06190 1150 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 FAAP100Q0VG06 881 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 NFX1Q12986 1120 aaKnown RBP15.79■□□□□ 0.12
LRIF1-202ENST00000485275 FKBP15Q5T1M5 1219 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 EFCAB13Q8IY85 973 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 ANKLE1Q8NAG6 615 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 SEZ6LQ9BYH1 1024 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 PADI3Q9ULW8 664 aa15.79■□□□□ 0.12
LRIF1-202ENST00000485275 NOL4O94818 638 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 ACTN1P12814 892 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 SLC9A1P19634 815 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 AXLP30530 894 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 FXR1P51114 621 aaKnown RBP eCLIP15.78■□□□□ 0.12
LRIF1-202ENST00000485275 MYL7Q01449 175 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 TLE2Q04725 743 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 LRRC26Q2I0M4 334 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 C1orf53Q5VUE5 145 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 C15orf39Q6ZRI6 1047 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 CCDC186Q7Z3E2 898 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 OR5B17Q8NGF7 314 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 LMO3Q8TAP4 145 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 SIX2Q9NPC8 291 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 AJAP1Q9UKB5 411 aaPredicted RBP15.78■□□□□ 0.12
LRIF1-202ENST00000485275 ALPK3Q96L96 1907 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 TET1Q8NFU7 2136 aa15.78■□□□□ 0.12
LRIF1-202ENST00000485275 GRM5P41594 1212 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 SLC10A6Q3KNW5 377 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 DCAF4L1Q3SXM0 396 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 LRRC8DQ7L1W4 858 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 SMG8Q8ND04 991 aaKnown RBP15.77■□□□□ 0.12
LRIF1-202ENST00000485275 CAGE1Q8TC20 777 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 ELMO3Q96BJ8 720 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 C11orf49Q9H6J7 331 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 FAM207AQ9NSI2 230 aaPredicted RBP15.77■□□□□ 0.12
LRIF1-202ENST00000485275 SNTG2Q9NY99 539 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 GCNT4Q9P109 453 aa15.77■□□□□ 0.12
LRIF1-202ENST00000485275 MEIS3P2A8K0S8 358 aa15.77■□□□□ 0.11
LRIF1-202ENST00000485275 TULP1O00294 542 aaPredicted RBP15.77■□□□□ 0.11
LRIF1-202ENST00000485275 NBNO60934 754 aa15.77■□□□□ 0.11
LRIF1-202ENST00000485275 PON1P27169 355 aa15.77■□□□□ 0.11
LRIF1-202ENST00000485275 MXI1P50539 228 aa15.77■□□□□ 0.11
LRIF1-202ENST00000485275 ENPEPQ07075 957 aa15.77■□□□□ 0.11
LRIF1-202ENST00000485275 PAK2Q13177 524 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms