RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 DDHD2O94830 711 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 LIG4P49917 911 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 COASYQ13057 564 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 KYAT1Q16773 422 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 TIGD5Q53EQ6 642 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 ZC2HC1CQ53FD0 456 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-213ENST00000485080 ALKAL1Q6UXT8 129 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 COLGALT2Q8IYK4 626 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 THNSL1Q8IYQ7 743 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 PAGE5Q96GU1 130 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 ZBTB45Q96K62 511 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-213ENST00000485080 CCDC94Q9BW85 323 aaPredicted RBP19.46■□□□□ 0.71
SREBF1-213ENST00000485080 ALG13Q9NP73 1137 aaKnown RBP19.46■□□□□ 0.71
SREBF1-213ENST00000485080 STK39Q9UEW8 545 aa19.46■□□□□ 0.71
SREBF1-213ENST00000485080 XIRP2A4UGR9 3374 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 A0A0B4J269 797 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 B4GALT3O60512 393 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 ZC3H11AO75152 810 aaKnown RBP eCLIP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 POMCP01189 267 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 ALDH2P05091 517 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 DNAJB1P25685 340 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 SCNN1GP51170 649 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 ASIC1P78348 528 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 KRT17Q04695 432 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 L1TD1Q5T7N2 865 aaKnown RBP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 PDE12Q6L8Q7 609 aaKnown RBP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 POF1BQ8WVV4 589 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 BICD1Q96G01 975 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 FAM193BQ96PV7 902 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 HAPLN2Q9GZV7 340 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 GOLPH3LQ9H4A5 285 aa19.45■□□□□ 0.7
SREBF1-213ENST00000485080 TOPORSQ9NS56 1045 aaPredicted RBP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 PUF60Q9UHX1 559 aaKnown RBP19.45■□□□□ 0.7
SREBF1-213ENST00000485080 PTGESO14684 152 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 FAM189A1O60320 539 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 SLC11A1P49279 550 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 POU5F1Q01860 360 aaKnown RBP19.44■□□□□ 0.7
SREBF1-213ENST00000485080 NAB2Q15742 525 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 SLFN12LQ6IEE8 588 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 SLC39A4Q6P5W5 647 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 STXBP4Q6ZWJ1 553 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 CEP120Q8N960 986 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 IGSF21Q96ID5 467 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 ACAP3Q96P50 834 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 ACCSQ96QU6 501 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 RPS6KC1Q96S38 1066 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 KLK14Q9P0G3 267 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 DNAJB4Q9UDY4 337 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 EXOC7Q9UPT5 735 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 GDAQ9Y2T3 454 aa19.44■□□□□ 0.7
SREBF1-213ENST00000485080 TDRD15B5MCY1 1934 aaKnown RBP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 CITO14578 2027 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 GOLGA6L4A6NEF3 574 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 EIF3DO15371 548 aaKnown RBP eCLIP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 ZNF202O95125 648 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 GCNT3O95395 438 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 THP07101 528 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 ADRB2P07550 413 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 CLTAP09496 248 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 KCNE1P15382 129 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 AFMP43652 599 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 CASP5P51878 434 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 YARSP54577 528 aaKnown RBP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 CUL4BQ13620 913 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 COL19A1Q14993 1142 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 POSTNQ15063 836 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 KRBA2Q6ZNG9 492 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 EPM2AIP1Q7L775 607 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 ZBTB33Q86T24 672 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 TMEM87AQ8NBN3 555 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 TMEM169Q96HH4 297 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 NSUN3Q9H649 340 aaKnown RBP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 TMEM206Q9H813 350 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 PLEKHA5Q9HAU0 1116 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 ANKFY1Q9P2R3 1169 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 FAN1Q9Y2M0 1017 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.43■□□□□ 0.7
SREBF1-213ENST00000485080 TRIP11Q15643 1979 aa19.43■□□□□ 0.7
SREBF1-213ENST00000485080 PLXNA4Q9HCM2 1894 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 FSCN2O14926 492 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 OGTO15294 1046 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 KLRC4O43908 158 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 NR1I2O75469 434 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 EFEMP2O95967 443 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 MYBP10242 640 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 PBX3P40426 434 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 TUSC3Q13454 348 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 FAM26FQ5R3K3 315 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 KANK3Q6NY19 840 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 DDX53Q86TM3 631 aaKnown RBP19.42■□□□□ 0.7
SREBF1-213ENST00000485080 TMEM173Q86WV6 379 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-213ENST00000485080 FMR1NBQ8N0W7 255 aaPredicted RBP19.42■□□□□ 0.7
SREBF1-213ENST00000485080 ENGASEQ8NFI3 743 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 SNX27Q96L92 541 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 PPP1R10Q96QC0 940 aaKnown RBP19.42■□□□□ 0.7
SREBF1-213ENST00000485080 TSPAN18Q96SJ8 248 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 FGFBP2Q9BYJ0 223 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 GBP3Q9H0R5 595 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 BLZF1Q9H2G9 400 aa19.42■□□□□ 0.7
SREBF1-213ENST00000485080 NGRNQ9NPE2 291 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms