RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 FAM47AQ5JRC9 791 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 RRP12Q5JTH9 1297 aaKnown RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 ATXN7L2Q5T6C5 722 aaPredicted RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 STRIP1Q5VSL9 837 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 CLRN3Q8NCR9 226 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 TGFBRAP1Q8WUH2 860 aa5.74□□□□□ -1.49
SMC4-215ENST00000484799 ACE2Q9BYF1 805 aaPredicted RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 QRSL1Q9H0R6 528 aaKnown RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 USP15Q9Y4E8 981 aaPredicted RBP5.74□□□□□ -1.49
SMC4-215ENST00000484799 LEFTY2O00292 366 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 SNRPA1P09661 255 aaKnown RBP5.73□□□□□ -1.49
SMC4-215ENST00000484799 IL2RBP14784 551 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 FLT3LGP49771 235 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 RAP2BP61225 183 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 TMPRSS15P98073 1019 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 ANKS6Q68DC2 871 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 CMTR2Q8IYT2 770 aaKnown RBP5.73□□□□□ -1.49
SMC4-215ENST00000484799 RNF169Q8NCN4 708 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 AGAP2Q99490 1192 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 WDR11Q9BZH6 1224 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 SENP6Q9GZR1 1112 aaPredicted RBP5.73□□□□□ -1.49
SMC4-215ENST00000484799 MOCS1Q9NZB8 636 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 NOX1Q9Y5S8 564 aa5.73□□□□□ -1.49
SMC4-215ENST00000484799 RAP2AP10114 183 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 GSPT1P15170 499 aaKnown RBP5.72□□□□□ -1.49
SMC4-215ENST00000484799 NR4A1P22736 598 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 DDX6P26196 483 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMC4-215ENST00000484799 NOMO1Q15155 1222 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 PRAMEF14Q5SWL7 426 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 HECTD2Q5U5R9 776 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 DPY19L2P1Q6NXN4 242 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 RHOUQ7L0Q8 258 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 GPRIN1Q7Z2K8 1008 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 RNF180Q86T96 592 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 SLC41A1Q8IVJ1 513 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 LILRA3Q8N6C8 439 aaPredicted RBP5.72□□□□□ -1.49
SMC4-215ENST00000484799 CPEB3Q8NE35 698 aaKnown RBP5.72□□□□□ -1.49
SMC4-215ENST00000484799 ATL2Q8NHH9 583 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 AHCYL2Q96HN2 611 aaKnown RBP5.72□□□□□ -1.49
SMC4-215ENST00000484799 SERHL2Q9H4I8 314 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 PRDM12Q9H4Q4 367 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 GREM2Q9H772 168 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 TESQ9UGI8 421 aaKnown RBP5.72□□□□□ -1.49
SMC4-215ENST00000484799 TBX22Q9Y458 520 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 FPGT-TNNI3KV9GXZ4 949 aa5.72□□□□□ -1.49
SMC4-215ENST00000484799 CENPVL1A0A0U1RR11 272 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 PJA2O43164 708 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 TMEM127O75204 238 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 BMPR1AP36894 532 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 SLC5A3P53794 718 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 RESTQ13127 1097 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 TOR2AQ5JU69 321 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 SDE2Q6IQ49 451 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 ARMC6Q6NXE6 501 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 FOXR2Q6PJQ5 311 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 STRA8Q7Z7C7 330 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 THNSL2Q86YJ6 484 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 AMOTL1Q8IY63 956 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 PQLC1Q8N2U9 271 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 OR7D4Q8NG98 312 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 TOR3AQ9H497 397 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 BCO1Q9HAY6 547 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 RBM12Q9NTZ6 932 aaKnown RBP5.71□□□□□ -1.5
SMC4-215ENST00000484799 TMEM140Q9NV12 185 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 DNAJC28Q9NX36 388 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 WASHC2AQ641Q2 1341 aa5.71□□□□□ -1.5
SMC4-215ENST00000484799 TMEM200CA6NKL6 621 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 DRGXA6NNA5 263 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 LPXNO60711 386 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 POMCP01189 267 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 HKR1P10072 659 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 KRT4P19013 534 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 FAM189BP81408 668 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 PDCD4Q53EL6 469 aaKnown RBP5.7□□□□□ -1.5
SMC4-215ENST00000484799 MFSD14BQ5SR56 506 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 MED25Q71SY5 747 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 ARHGEF19Q8IW93 802 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 REPS2Q8NFH8 660 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 GPR150Q8NGU9 434 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 STON2Q8WXE9 905 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 MAP3K2Q9Y2U5 619 aa5.7□□□□□ -1.5
SMC4-215ENST00000484799 UNC119BA6NIH7 251 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 IGSF3O75054 1194 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 FOSP01100 380 aaPredicted RBP5.69□□□□□ -1.5
SMC4-215ENST00000484799 ZSCAN20P17040 1043 aaPredicted RBP5.69□□□□□ -1.5
SMC4-215ENST00000484799 ATP5JP18859 108 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 ZEB1P37275 1124 aaPredicted RBP5.69□□□□□ -1.5
SMC4-215ENST00000484799 MASP1P48740 699 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 CHN2P52757 468 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 BLOC1S1P78537 153 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 SP140Q13342 867 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 STAT4Q14765 748 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 ATP2B3Q16720 1220 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 MUM1Q2TAK8 710 aa5.69□□□□□ -1.5
SMC4-215ENST00000484799 MRI1Q9BV20 369 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms