RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 PRKCEQ02156 737 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 SPIRE1Q08AE8 756 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 SETDB1Q15047 1291 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 FAM26DQ5JW98 314 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 FAM43BQ6ZT52 329 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-207ENST00000483969 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 TPH2Q8IWU9 490 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 METTL13Q8N6R0 699 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 TRAPPC12Q8WVT3 735 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 HSD17B14Q9BPX1 270 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
COL8A1-207ENST00000483969 FAM49AQ9H0Q0 323 aaPredicted RBP9.95□□□□□ -0.82
COL8A1-207ENST00000483969 RGL1Q9NZL6 768 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 LRWD1Q9UFC0 647 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 MYH6P13533 1939 aa9.95□□□□□ -0.82
COL8A1-207ENST00000483969 EFCAB14O75071 495 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 LYPLA2O95372 231 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 CXCL10P02778 98 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 CTTNQ14247 550 aaKnown RBP9.94□□□□□ -0.82
COL8A1-207ENST00000483969 TARBP2Q15633 366 aaKnown RBP9.94□□□□□ -0.82
COL8A1-207ENST00000483969 UGCGQ16739 394 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 LRIT3Q3SXY7 679 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 MTERF2Q49AM1 385 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 C9orf50Q5SZB4 431 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 ARL6IP4Q66PJ3 421 aaKnown RBP9.94□□□□□ -0.82
COL8A1-207ENST00000483969 EFCAB12Q6NXP0 572 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 CNKSR3Q6P9H4 555 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 RUFY4Q6ZNE9 571 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 FERMT3Q86UX7 667 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 KIAA0319LQ8IZA0 1049 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 USP38Q8NB14 1042 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 OR13H1Q8NG92 308 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 PIK3R5Q8WYR1 880 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 HERVK_113Q902F9 699 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 SEPT8Q92599 483 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 WNT8BQ93098 351 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 CEP170P1Q96L14 293 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
COL8A1-207ENST00000483969 LXNQ9BS40 222 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 SUGCTQ9HAC7 445 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 TUFT1Q9NNX1 390 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 ANKEF1Q9NU02 776 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 TRIM33Q9UPN9 1127 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 MTMR6Q9Y217 621 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 SQORQ9Y6N5 450 aa9.94□□□□□ -0.82
COL8A1-207ENST00000483969 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 ABHD14A-ACY1A0A1B0GW23 586 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 NBNO60934 754 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 MAFO75444 373 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 BAIAP3O94812 1187 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 STBD1O95210 358 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 C22orf31O95567 290 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CHRNA1P02708 482 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CTSHP09668 335 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 MUTP22033 750 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 YWHABP31946 246 aaKnown RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 MRPS6P82932 125 aaKnown RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 ATP2C1P98194 919 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CYP4A11Q02928 519 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 IKBKEQ14164 716 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 XKR9Q5GH70 373 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 ODR4Q5SWX8 454 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 KRT79Q5XKE5 535 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 HAUS3Q68CZ6 603 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 ANO5Q75V66 913 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 OTOP2Q7RTS6 562 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 SLC7A3Q8WY07 619 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 APBB2Q92870 758 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CCDC43Q96MW1 224 aaKnown RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 MAP7D2Q96T17 732 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 POLR3CQ9BUI4 534 aaPredicted RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CELF4Q9BZC1 486 aaKnown RBP9.93□□□□□ -0.82
COL8A1-207ENST00000483969 SAP130Q9H0E3 1048 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CYP26B1Q9NR63 512 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 TRPV2Q9Y5S1 764 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 CDY2AQ9Y6F7 541 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 SLC4A7Q9Y6M7 1214 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 MCM3APO60318 1980 aa9.93□□□□□ -0.82
COL8A1-207ENST00000483969 FRMPD3Q5JV73 1810 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 ALX3O95076 343 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 RPA1P27694 616 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 CCT6AP40227 531 aaKnown RBP9.92□□□□□ -0.82
COL8A1-207ENST00000483969 CRYBB1P53674 252 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-207ENST00000483969 MGAT3Q09327 533 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 HYAL2Q12891 473 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 RESTQ13127 1097 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 GPNMBQ14956 572 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 SF3A1Q15459 793 aaKnown RBP9.92□□□□□ -0.82
COL8A1-207ENST00000483969 PLEKHG4Q58EX7 1191 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 RASIP1Q5U651 963 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 CATSPER3Q86XQ3 398 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 IGSF22Q8N9C0 903 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 DBF4BQ8NFT6 615 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 PHOSPHO2Q8TCD6 241 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 ZBTB10Q96DT7 871 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 SPACA7Q96KW9 195 aa9.92□□□□□ -0.82
COL8A1-207ENST00000483969 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
COL8A1-207ENST00000483969 CXXC1Q9P0U4 656 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms