RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 FAM47CQ5HY64 1035 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 TAF2Q6P1X5 1199 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 PDXDC1Q6P996 788 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 GJB7Q6PEY0 223 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 C15orf39Q6ZRI6 1047 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 SERINC5Q86VE9 423 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 BRSK2Q8IWQ3 736 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 CEP120Q8N960 986 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 EHBP1Q8NDI1 1231 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 CCDC112Q8NEF3 446 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 OR8K1Q8NGG5 319 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 IQCDQ96DY2 449 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 BAG1Q99933 345 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 TCHPQ9BT92 498 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 INTS2Q9H0H0 1204 aaKnown RBP10.97□□□□□ -0.65
HDAC6-226ENST00000483656 PDE11AQ9HCR9 933 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 GCNT4Q9P109 453 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 PTPRJQ12913 1337 aa10.97□□□□□ -0.65
HDAC6-226ENST00000483656 FRMPD3Q5JV73 1810 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 A0A1B0GUA9 196 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MOXD2PA6NHM9 499 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 STX10O60499 249 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 CABYRO75952 493 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 C4BPAP04003 597 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MCF2P10911 925 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 EIF4BP23588 611 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 HNRNPH3P31942 346 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 GTF2H1P32780 548 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MXI1P50539 228 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 CRYBB1P53674 252 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 POLR2FP61218 127 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MGAT3Q09327 533 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 ITGA7Q13683 1181 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MTFR1Q15390 333 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 MEA1Q16626 185 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM71Q2Q1W2 868 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 ZNF568Q3ZCX4 644 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 SCARA3Q6AZY7 606 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 IQCEQ6IPM2 695 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 TRIM65Q6PJ69 517 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 RAD9BQ6WBX8 426 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 SV2AQ7L0J3 742 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 RPAINQ86UA6 219 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM192Q8IY95 271 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 SLC43A3Q8NBI5 491 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 DHX38Q92620 1227 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 SEMA4DQ92854 862 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 SCLT1Q96NL6 688 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 CHP1Q99653 195 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 NAA15Q9BXJ9 866 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 CELF4Q9BZC1 486 aaKnown RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 TMEM8AQ9HCN3 771 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 NLRC4Q9NPP4 1024 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 RRAGDQ9NQL2 400 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 PAK6Q9NQU5 681 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 RBAKQ9NYW8 714 aaPredicted RBP10.96□□□□□ -0.65
HDAC6-226ENST00000483656 CEP72Q9P209 647 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 GINS2Q9Y248 185 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 COQ4Q9Y3A0 265 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 FHOD1Q9Y613 1164 aa10.96□□□□□ -0.65
HDAC6-226ENST00000483656 A0A1W2PQ45 241 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 A0A1W2PQY0 241 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 SOWAHDA6NJG2 315 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 LRRC53A6NM62 1247 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 N4BP1O75113 896 aaKnown RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 CHRNA1P02708 482 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 DLATP10515 647 aaKnown RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 UCHL3P15374 230 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 KCNJ6P48051 423 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 MRPS6P82932 125 aaKnown RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 PTPN11Q06124 597 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 MTF1Q14872 753 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 ENOX2Q16206 610 aaKnown RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 LMBRD2Q68DH5 695 aaPredicted RBP10.95□□□□□ -0.66
HDAC6-226ENST00000483656 KRT39Q6A163 491 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 RRAGAQ7L523 313 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 CATSPER4Q7RTX7 472 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 THNSL1Q8IYQ7 743 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 OR5B17Q8NGF7 314 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 TAS1R2Q8TE23 839 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 CGRRF1Q99675 332 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 OSBPL7Q9BZF2 842 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 FBXL5Q9UKA1 691 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 PLAGL2Q9UPG8 496 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 PHF24Q9UPV7 400 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 TRPV2Q9Y5S1 764 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 CDY2AQ9Y6F7 541 aa10.95□□□□□ -0.66
HDAC6-226ENST00000483656 ARHGAP6O43182 974 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ZNF500O60304 480 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 ERLIN2O94905 339 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 VNN1O95497 513 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 STAG3L1P0CL83 205 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 HSPA8P11142 646 aaKnown RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 CCL5P13501 91 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 JAM2P57087 298 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 OSTNP61366 133 aa10.94□□□□□ -0.66
HDAC6-226ENST00000483656 HSP90AA2PQ14568 343 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 PCBP1Q15365 356 aaKnown RBP eCLIP10.94□□□□□ -0.66
HDAC6-226ENST00000483656 PTGISQ16647 500 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms