RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PPP2R5AQ15172 486 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 NT5DC1Q5TFE4 455 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 PALB2Q86YC2 1186 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 IFT74Q96LB3 600 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 RXFP1Q9HBX9 757 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.47■□□□□ 0.87
CLK1-211ENST00000481641 SSX2IPQ9Y2D8 614 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 GDAQ9Y2T3 454 aa20.47■□□□□ 0.87
CLK1-211ENST00000481641 DENND4AQ7Z401 1863 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 ST18O60284 1047 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 TADA2AO75478 443 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 TUSC3Q13454 348 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 HSP90AA2PQ14568 343 aaPredicted RBP20.46■□□□□ 0.87
CLK1-211ENST00000481641 KCNK18Q7Z418 384 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 FBXL6Q8N531 539 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 RIN2Q8WYP3 895 aaPredicted RBP20.46■□□□□ 0.87
CLK1-211ENST00000481641 KIFAP3Q92845 792 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 ADPGKQ9BRR6 497 aa20.46■□□□□ 0.87
CLK1-211ENST00000481641 MMTAG2Q9BU76 263 aaKnown RBP20.46■□□□□ 0.87
CLK1-211ENST00000481641 RFPL2O75678 378 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 GLUD1P00367 558 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 GJB2P29033 226 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 VCPP55072 806 aaKnown RBP20.45■□□□□ 0.86
CLK1-211ENST00000481641 NHLH1Q02575 133 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 ZRSR1Q15695 479 aaKnown RBP20.45■□□□□ 0.86
CLK1-211ENST00000481641 USP41Q3LFD5 358 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 KRT79Q5XKE5 535 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 PRSS55Q6UWB4 352 aaPredicted RBP20.45■□□□□ 0.86
CLK1-211ENST00000481641 DTHD1Q6ZMT9 781 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 SUGP1Q8IWZ8 645 aaKnown RBP20.45■□□□□ 0.86
CLK1-211ENST00000481641 ZDHHC14Q8IZN3 488 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 DAW1Q8N136 415 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 RUSC1Q9BVN2 902 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 RAB34Q9BZG1 259 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 SORCS3Q9UPU3 1222 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 DNM3Q9UQ16 869 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 ZMYM2Q9UBW7 1377 aa20.45■□□□□ 0.86
CLK1-211ENST00000481641 CCDC195A0A1B0GUA6 201 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 CCDC169A6NNP5 214 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 HIP1RO75146 1068 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 KIF4AO95239 1232 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 THP07101 528 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 IGFBP6P24592 240 aaPredicted RBP20.44■□□□□ 0.86
CLK1-211ENST00000481641 PEX3P56589 373 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 MTMR3Q13615 1198 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 NAB2Q15742 525 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 RTP2Q5QGT7 225 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 ATF7IP2Q5U623 682 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 CCDC149Q6ZUS6 474 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 ALYREFQ86V81 257 aaKnown RBP20.44■□□□□ 0.86
CLK1-211ENST00000481641 PRSS33Q8NF86 280 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 PLIN2Q99541 437 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 USTQ9Y2C2 406 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 TRIP11Q15643 1979 aa20.44■□□□□ 0.86
CLK1-211ENST00000481641 K7ERI5 159 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 LAD1O00515 517 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 PRPHP41219 470 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 NPTX2P47972 431 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 EFNA5P52803 228 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 GLRA4Q5JXX5 417 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 RINT1Q6NUQ1 792 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 KCNH6Q9H252 994 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 KIF3AQ9Y496 699 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 STK24Q9Y6E0 443 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 KMT2EQ8IZD2 1858 aa20.43■□□□□ 0.86
CLK1-211ENST00000481641 SFI1A8K8P3 1242 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 TGM5O43548 720 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 MAPK7Q13164 816 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 DCAF4L1Q3SXM0 396 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 C15orf39Q6ZRI6 1047 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 C1orf186Q6ZWK4 172 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 TAS1R3Q7RTX0 852 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 CEP57Q86XR8 500 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 PLCD3Q8N3E9 789 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 CEP120Q8N960 986 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 CMASQ8NFW8 434 aaPredicted RBP20.42■□□□□ 0.86
CLK1-211ENST00000481641 PNMA5Q96PV4 448 aa20.42■□□□□ 0.86
CLK1-211ENST00000481641 MTCL1Q9Y4B5 1905 aaKnown RBP20.42■□□□□ 0.86
CLK1-211ENST00000481641 H3BQV1 296 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 N4BP1O75113 896 aaKnown RBP20.41■□□□□ 0.86
CLK1-211ENST00000481641 ATP2C1P98194 919 aaPredicted RBP20.41■□□□□ 0.86
CLK1-211ENST00000481641 RAD51AP2Q09MP3 1159 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 RILPL1Q5EBL4 403 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 FAM171A1Q5VUB5 890 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 LILRA6Q6PI73 481 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 OTOP3Q7RTS5 596 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 UBALD2Q8IYN6 164 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 ZNF707Q96C28 371 aaPredicted RBP20.41■□□□□ 0.86
CLK1-211ENST00000481641 ACSF2Q96CM8 615 aaPredicted RBP20.41■□□□□ 0.86
CLK1-211ENST00000481641 ACO2Q99798 780 aaKnown RBP20.41■□□□□ 0.86
CLK1-211ENST00000481641 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.41■□□□□ 0.86
CLK1-211ENST00000481641 FNIP2Q9P278 1114 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 TNFSF13BQ9Y275 285 aa20.41■□□□□ 0.86
CLK1-211ENST00000481641 SF3B1O75533 1304 aaKnown RBP eCLIP20.41■□□□□ 0.865e-6■■■■■ 27.1
CLK1-211ENST00000481641 VWA3AA6NCI4 1184 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 AVPR2P30518 371 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 OSTNP61366 133 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 PIEZO1Q92508 2521 aa20.4■□□□□ 0.86
CLK1-211ENST00000481641 SMG7Q92540 1137 aaKnown RBP20.4■□□□□ 0.86
CLK1-211ENST00000481641 PHOX2BQ99453 314 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms