RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 ANKRD35Q8N283 1001 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 ZNF808Q8N4W9 903 aaPredicted RBP4.95□□□□□ -1.62
COPA-204ENST00000481522 CNTD1Q8N815 330 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 PIK3C3Q8NEB9 887 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 PPP1R14CQ8TAE6 165 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 RAX2Q96IS3 184 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 FDXACB1Q9BRP7 624 aaPredicted RBP4.95□□□□□ -1.62
COPA-204ENST00000481522 EPC1Q9H2F5 836 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 VTA1Q9NP79 307 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 C14orf119Q9NWQ9 140 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 EVLQ9UI08 416 aaPredicted RBP4.95□□□□□ -1.62
COPA-204ENST00000481522 EDARQ9UNE0 448 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 CDY2AQ9Y6F7 541 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 WASHC2AQ641Q2 1341 aa4.95□□□□□ -1.62
COPA-204ENST00000481522 GOLGA8AA7E2F4 631 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 K7ESF4 209 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 RAMP2O60895 175 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 HIBADHP31937 336 aaKnown RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 SCAND1P57086 179 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 IGBP1P78318 339 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 MEF2AQ02078 507 aaPredicted RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 TRIM25Q14258 630 aaKnown RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 FAM50AQ14320 339 aaKnown RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 MFSD5Q6N075 450 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 FAM111BQ6SJ93 734 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 EAF2Q96CJ1 260 aaPredicted RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 PAWRQ96IZ0 340 aaKnown RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 PRRX2Q99811 253 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 QRSL1Q9H0R6 528 aaKnown RBP4.94□□□□□ -1.62
COPA-204ENST00000481522 ING3Q9NXR8 418 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 TMPRSS11EQ9UL52 423 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 GIT1Q9Y2X7 761 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 UHRF1BP1Q6BDS2 1440 aa4.94□□□□□ -1.62
COPA-204ENST00000481522 BAHCC1Q9P281 2608 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 RTEL1-TNFRSF6BF6WH68 1400 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 IPO13O94829 963 aaKnown RBP4.93□□□□□ -1.62
COPA-204ENST00000481522 MTHFD2P13995 350 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 GNAT2P19087 354 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 WNT3AP56704 352 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 DUSP2Q05923 314 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 ITKQ08881 620 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 ELAVL1Q15717 326 aaKnown RBP4.93□□□□□ -1.62
COPA-204ENST00000481522 FHOD3Q2V2M9 1422 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 FKBP15Q5T1M5 1219 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 OR5M3Q8NGP4 307 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 TGFBRAP1Q8WUH2 860 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 LMBR1Q8WVP7 490 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 AUTS2Q8WXX7 1259 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 MIEF2Q96C03 454 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 MTMR8Q96EF0 704 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 SIGLEC1Q9BZZ2 1709 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 HOMER2Q9NSB8 354 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 AURKAIP1Q9NWT8 199 aaPredicted RBP4.93□□□□□ -1.62
COPA-204ENST00000481522 DPP7Q9UHL4 492 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 SH3BP1Q9Y3L3 701 aa4.93□□□□□ -1.62
COPA-204ENST00000481522 VWDEQ8N2E2 1590 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 LTA4HP09960 611 aaKnown RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 GYPEP15421 78 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 EVA1CP58658 441 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 ERVK-21P61565 698 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 MRPS9P82933 396 aaKnown RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 CDK17Q00537 523 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 KLF1Q13351 362 aaPredicted RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 MTMR1Q13613 665 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 SYDE2Q5VT97 1194 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 ZNF627Q7L945 461 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 LYSMD2Q8IV50 215 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 SLC41A1Q8IVJ1 513 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 CMIPQ8IY22 773 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 AMOTL1Q8IY63 956 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 THEMISQ8N1K5 641 aaPredicted RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 MSL3Q8N5Y2 521 aaKnown RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 MB21D1Q8N884 522 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 ZNF512Q96ME7 567 aaPredicted RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 PRDM12Q9H4Q4 367 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 ZNF703Q9H7S9 590 aaPredicted RBP4.92□□□□□ -1.62
COPA-204ENST00000481522 ZBTB21Q9ULJ3 1066 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 KIAA0586Q9BVV6 1533 aa4.92□□□□□ -1.62
COPA-204ENST00000481522 AATKQ6ZMQ8 1374 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 SETD1BQ9UPS6 1966 aaKnown RBP4.91□□□□□ -1.62
COPA-204ENST00000481522 A0A1W2PR48 441 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 MFAP3LO75121 409 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 KATNA1O75449 491 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 CASRP41180 1078 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 TAS1R1Q7RTX1 841 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 GSPT2Q8IYD1 628 aaKnown RBP4.91□□□□□ -1.62
COPA-204ENST00000481522 RPUSD2Q8IZ73 545 aaKnown RBP4.91□□□□□ -1.62
COPA-204ENST00000481522 CLIP3Q96DZ5 547 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 IL17RAQ96F46 866 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 ORAI2Q96SN7 254 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 BRIP1Q9BX63 1249 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 CCM2LQ9NUG4 571 aaPredicted RBP4.91□□□□□ -1.62
COPA-204ENST00000481522 DNAJC28Q9NX36 388 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 TRHDEQ9UKU6 1024 aa4.91□□□□□ -1.62
COPA-204ENST00000481522 INO80B-WBP1J3KQ70 363 aa4.9□□□□□ -1.63
COPA-204ENST00000481522 TMEM127O75204 238 aa4.9□□□□□ -1.63
COPA-204ENST00000481522 CFBP00751 764 aa4.9□□□□□ -1.63
COPA-204ENST00000481522 GPR3P46089 330 aa4.9□□□□□ -1.63
COPA-204ENST00000481522 MAN2A2P49641 1150 aa4.9□□□□□ -1.63
COPA-204ENST00000481522 CCT2P78371 535 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms