RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	HLA-DOA	P06340	250 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	CLEC2L	P0C7M8	214 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	RBP3	P10745	1247 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	ADCYAP1R1	P41586	468 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	FAM102A	Q5T9C2	384 aa	Predicted RBP	4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	LMBR1L	Q6UX01	489 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	FKBP9P1	Q75LS8	142 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	PPM1K	Q8N3J5	372 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	ZNF610	Q8N9Z0	462 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	OR2W6P	Q8NHA6	318 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	CAGE1	Q8TC20	777 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	TFAP2C	Q92754	450 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	MFSD3	Q96ES6	412 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	CDC5L	Q99459	802 aa	Known RBP	4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	KIAA1586	Q9HCI6	787 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	RNF7	Q9UBF6	113 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	FPGT-TNNI3K	V9GXZ4	949 aa		4.68	□□□□□ -1.66
CCNL1-223	ENST00000481173	TBKBP1	A7MCY6	615 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	PRAMEF4	O60810	478 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	MYCLP1	P12525	358 aa	Predicted RBP	4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	XPA	P23025	273 aa	Predicted RBP	4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	LSP1	P33241	339 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	LSS	P48449	732 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	BLOC1S1	P78537	153 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	PPARA	Q07869	468 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	TERF2	Q15554	542 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	BROX	Q5VW32	411 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	METRNL	Q641Q3	311 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	ARHGEF25	Q86VW2	580 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	MDM1	Q8TC05	714 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	PHACTR3	Q96KR7	559 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	DUSP26	Q9BV47	211 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173	PRDM12	Q9H4Q4	367 aa		4.67	□□□□□ -1.66
CCNL1-223	ENST00000481173		A0A087X0B3	334 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	GSG1L2	A8MUP6	293 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173		B5MCH6	92 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	MGST3	O14880	152 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	NRP2	O60462	931 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	RAB11FIP3	O75154	756 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	MGAT1	P26572	445 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	NRG3	P56975	720 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	OCRL	Q01968	901 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	SCAP	Q12770	1279 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	DDB1	Q16531	1140 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	GPR158	Q5T848	1215 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	GPR149	Q86SP6	731 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	C11orf74	Q86VG3	221 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	ZNF384	Q8TF68	577 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	CEP95	Q96GE4	821 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173		Q96MF0	132 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	EMC7	Q9NPA0	242 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	TMPRSS11E	Q9UL52	423 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	PLAA	Q9Y263	795 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	PPP2R3B	Q9Y5P8	575 aa		4.66	□□□□□ -1.66
CCNL1-223	ENST00000481173	KDM1A	O60341	852 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	PDE8A	O60658	829 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	RBMXL2	O75526	392 aa	Known RBP	4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	ITGA10	O75578	1167 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	CDKL5	O76039	1030 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	ABCG1	P45844	678 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	CHN2	P52757	468 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	PHC1	P78364	1004 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	SIM1	P81133	766 aa	Predicted RBP	4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	FOXF2	Q12947	444 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	BMT2	Q1RMZ1	405 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	ABHD15	Q6UXT9	468 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	FRMD7	Q6ZUT3	714 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	LYSMD2	Q8IV50	215 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	SLC5A5	Q92911	643 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	EVL	Q9UI08	416 aa	Predicted RBP	4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	NOC2L	Q9Y3T9	749 aa	Known RBP	4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	MAST3	O60307	1309 aa		4.65	□□□□□ -1.67
CCNL1-223	ENST00000481173	COL11A2	P13942	1736 aa	Predicted RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	DNAJC9-AS1	A6NH13	148 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	LRRC3C	A6NJW4	275 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	FOS	P01100	380 aa	Predicted RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	CFI	P05156	583 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	LPL	P06858	475 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	ELANE	P08246	267 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	LTA4H	P09960	611 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	FDXR	P22570	491 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	CANX	P27824	592 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	ID4	P47928	161 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	GPR15	P49685	360 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	GYS2	P54840	703 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	MANF	P55145	182 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	MXRA7	P84157	204 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	TRIM25	Q14258	630 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	ZNF169	Q14929	603 aa	Predicted RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	ATP13A4	Q4VNC1	1196 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	CT83	Q5H943	113 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	MFSD14B	Q5SR56	506 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	GLB1L2	Q8IW92	636 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	SRRM1	Q8IYB3	904 aa	Known RBP	4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	UBR7	Q8N806	425 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	OR56A1	Q8NGH5	318 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	SLC9A6	Q92581	669 aa		4.64	□□□□□ -1.67
CCNL1-223	ENST00000481173	SLC29A3	Q9BZD2	475 aa		4.64	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms