RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 PTGISQ16647 500 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 EEF1DP3Q658K8 133 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 KRT39Q6A163 491 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 SLC43A3Q8NBI5 491 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 DNAJC7Q99615 494 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 CGRRF1Q99675 332 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 TMEM8AQ9HCN3 771 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 FAM207AQ9NSI2 230 aaPredicted RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 ABHD10Q9NUJ1 306 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 CPSF3Q9UKF6 684 aaKnown RBP16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 GINS2Q9Y248 185 aa16.06■□□□□ 0.16
SNRNP200-205ENST00000480835 ANK1P16157 1881 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CSDE1O75534 798 aaKnown RBP16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 IL18RAPO95256 599 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 SKILP12757 684 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CCL5P13501 91 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 RFX1P22670 979 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 KCNJ6P48051 423 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 LRMPQ12912 555 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CBWD6Q4V339 395 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CBWD3Q5JTY5 395 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CBWD5Q5RIA9 395 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 NOTUMQ6P988 496 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 FBXO46Q6PJ61 603 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CACNA2D4Q7Z3S7 1137 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CCDC127Q96BQ5 260 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 BAG1Q99933 345 aaPredicted RBP16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 TMEM117Q9H0C3 514 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 GANQ9H2C0 597 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CDHR5Q9HBB8 845 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 STARD7Q9NQZ5 370 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 OGDHLQ9ULD0 1010 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CDY2AQ9Y6F7 541 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 CITO14578 2027 aa16.05■□□□□ 0.16
SNRNP200-205ENST00000480835 NOL4O94818 638 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 CLTAP09496 248 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 DLATP10515 647 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 SLC9A1P19634 815 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 MSNP26038 577 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 GCLMP48507 274 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 GOLGA8FQ08AF8 430 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 GOLGA8DPQ0D2H9 430 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 EPC2Q52LR7 807 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 KLHDC7AQ5VTJ3 777 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 SLC27A1Q6PCB7 646 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 THNSL1Q8IYQ7 743 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 EHBP1Q8NDI1 1231 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 CPB2Q96IY4 423 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 INTS2Q9H0H0 1204 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 RNF208Q9H0X6 261 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 RPF1Q9H9Y2 349 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 ZNHIT6Q9NWK9 470 aaKnown RBP16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 MYO6Q9UM54 1294 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
SNRNP200-205ENST00000480835 RALGAPA2Q2PPJ7 1873 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 ESPNB1AK53 854 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 RNF225M0QZC1 329 aaPredicted RBP16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 ARHGAP6O43182 974 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 TNNI1P19237 187 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 HNRNPH3P31942 346 aaKnown RBP16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 MGAT3Q09327 533 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 ZBTB41Q5SVQ8 909 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 DPY19L2P1Q6NXN4 242 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 PDXDC1Q6P996 788 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 C15orf39Q6ZRI6 1047 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 TMTC1Q8IUR5 882 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 TMEM139Q8IV31 216 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 WDR49Q8IV35 697 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 SYN2Q92777 582 aaPredicted RBP16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 SIX2Q9NPC8 291 aa16.03■□□□□ 0.16
SNRNP200-205ENST00000480835 ARVCFO00192 962 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 EPHB6O15197 1021 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 B4GALT4O60513 344 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 ZC3H11AO75152 810 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 STAG3L1P0CL83 205 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 UCHL3P15374 230 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 FGFR4P22455 802 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 HOXA11P31270 313 aaPredicted RBP16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 TNFSF9P41273 254 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 GRM5P41594 1212 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 POLR2FP61218 127 aaKnown RBP16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 CDK17Q00537 523 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 MTFR1Q15390 333 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 MEA1Q16626 185 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 FAM26DQ5JW98 314 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 CYP26C1Q6V0L0 522 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 SV2AQ7L0J3 742 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 FMNL3Q8IVF7 1028 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 CD302Q8IX05 232 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 FBXL13Q8NEE6 735 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 LMO3Q8TAP4 145 aa16.02■□□□□ 0.16
SNRNP200-205ENST00000480835 TMEM40Q8WWA1 233 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms