RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 PARP2Q9UGN5 583 aa21.56■■□□□ 1.04
LIME1-205ENST00000480139 CARNS1A5YM72 827 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 TISP43B9A030 160 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 KIAA0391O15091 583 aaKnown RBP21.55■■□□□ 1.04
LIME1-205ENST00000480139 ADSSP30520 456 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 POU5F1Q01860 360 aaKnown RBP21.55■■□□□ 1.04
LIME1-205ENST00000480139 KNOP1Q1ED39 458 aaKnown RBP21.55■■□□□ 1.04
LIME1-205ENST00000480139 COBLL1Q53SF7 1204 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 LRRC55Q6ZSA7 311 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 THNSL1Q8IYQ7 743 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 GSTCDQ8NEC7 633 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 ACAP3Q96P50 834 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 GAD1Q99259 594 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 IKZF4Q9H2S9 585 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 TTYH1Q9H313 450 aaPredicted RBP21.55■■□□□ 1.04
LIME1-205ENST00000480139 CLSTN2Q9H4D0 955 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 CWH43Q9H720 699 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 TYW1Q9NV66 732 aaKnown RBP21.55■■□□□ 1.04
LIME1-205ENST00000480139 TBC1D13Q9NVG8 400 aa21.55■■□□□ 1.04
LIME1-205ENST00000480139 PDCD11Q14690 1871 aaKnown RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 TGFB1I1O43294 461 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 CLTAP09496 248 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 HARSP12081 509 aaKnown RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 YARSP54577 528 aaKnown RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 XKR4Q5GH76 650 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 ZNF658Q5TYW1 1059 aaPredicted RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 GUF1Q8N442 669 aaKnown RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 POMGNT1Q8WZA1 660 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 ZFP42Q96MM3 310 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 PLVAPQ9BX97 442 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 AGO2Q9UKV8 859 aaKnown RBP21.54■■□□□ 1.04
LIME1-205ENST00000480139 INPP5FQ9Y2H2 1132 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 GDAQ9Y2T3 454 aa21.54■■□□□ 1.04
LIME1-205ENST00000480139 C5orf67F2Z3F1 127 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 MBD3O95983 291 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 LAG3P18627 525 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 AFF1P51825 1210 aaKnown RBP21.53■■□□□ 1.04
LIME1-205ENST00000480139 GRIK3Q13003 919 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 ALKAL1Q6UXT8 129 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 HS2ST1Q7LGA3 356 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 TMEM192Q8IY95 271 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 GOLGA5Q8TBA6 731 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 GPT2Q8TD30 523 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 TMEM174Q8WUU8 243 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 ERCC4Q92889 916 aaPredicted RBP21.53■■□□□ 1.04
LIME1-205ENST00000480139 SNX27Q96L92 541 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 RPS6KC1Q96S38 1066 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 C17orf80Q9BSJ5 609 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 PLEKHA5Q9HAU0 1116 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 AAASQ9NRG9 546 aa21.53■■□□□ 1.04
LIME1-205ENST00000480139 CPSF3Q9UKF6 684 aaKnown RBP21.53■■□□□ 1.04
LIME1-205ENST00000480139 TRIP11Q15643 1979 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 LDHAP00338 332 aaKnown RBP21.52■■□□□ 1.04
LIME1-205ENST00000480139 RB1P06400 928 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 ADRB2P07550 413 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 MCM4P33991 863 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 BMPR1AP36894 532 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 SCNN1GP51170 649 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 OSTNP61366 133 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 RNASELQ05823 741 aaKnown RBP21.52■■□□□ 1.04
LIME1-205ENST00000480139 NELFCDQ8IXH7 590 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 C12orf56Q8IXR9 622 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 KCTD10Q9H3F6 313 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 SEMA6BQ9H3T3 888 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 AGPAT3Q9NRZ7 376 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 KLK14Q9P0G3 267 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 CNTN3Q9P232 1028 aa21.52■■□□□ 1.04
LIME1-205ENST00000480139 COL4A4P53420 1690 aaPredicted RBP21.52■■□□□ 1.04
LIME1-205ENST00000480139 PDXKO00764 312 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 PTGESO14684 152 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 POMCP01189 267 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 DSC1Q08554 894 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 CAMK4Q16566 473 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 EPC2Q52LR7 807 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 SEZ6Q53EL9 994 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 ARMCX5Q6P1M9 558 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 SPRED2Q7Z698 418 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 TRIML1Q8N9V2 468 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 COLGALT1Q8NBJ5 622 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 P2RX5Q93086 422 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 TSPAN18Q96SJ8 248 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 CBWD1Q9BRT8 395 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 TMEM175Q9BSA9 504 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 NUP62CLQ9H1M0 184 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 MIOSQ9NXC5 875 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 KIAA1468Q9P260 1216 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 HCSTQ9UBK5 93 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 MAN1B1Q9UKM7 699 aa21.51■■□□□ 1.03
LIME1-205ENST00000480139 ANK1P16157 1881 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 TTC26A0AVF1 554 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 MEFVO15553 781 aaPredicted RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 THP07101 528 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 KCNE1P15382 129 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 CTNNB1P35222 781 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 TNFSF9P41273 254 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 HSP90AA2PQ14568 343 aaPredicted RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 NAB2Q15742 525 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 ENOX2Q16206 610 aaKnown RBP21.5■■□□□ 1.03
LIME1-205ENST00000480139 SLC10A6Q3KNW5 377 aa21.5■■□□□ 1.03
LIME1-205ENST00000480139 ZBTB41Q5SVQ8 909 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms