RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 LIMCH1Q9UPQ0 1083 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 SSX2IPQ9Y2D8 614 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 NUMBLQ9Y6R0 609 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 NCOR2Q9Y618 2525 aa7.85□□□□□ -1.15
COL17A1-205ENST00000480127 OTOGLQ3ZCN5 2332 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 COL4A3Q01955 1670 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 TULP1O00294 542 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 TGM5O43548 720 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 JAK2O60674 1132 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 C1RP00736 705 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 NCLP19338 710 aaKnown RBP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 AXLP30530 894 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 RBM25P49756 843 aaKnown RBP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 GPC5P78333 572 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 DSC1Q08554 894 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 PCBP1Q15365 356 aaKnown RBP eCLIP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 ME3Q16798 604 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 ERICH6BQ5W0A0 696 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 HAUS3Q68CZ6 603 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 GET4Q7L5D6 327 aaPredicted RBP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 FERMT3Q86UX7 667 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 PALB2Q86YC2 1186 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 ZNF579Q8NAF0 562 aaKnown RBP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 MCPH1Q8NEM0 835 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 RASSF8Q8NHQ8 419 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 DEPTORQ8TB45 409 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 CCDC51Q96ER9 411 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 B3GALT6Q96L58 329 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 MBOAT7Q96N66 472 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 PRKD2Q9BZL6 878 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 RNF39Q9H2S5 420 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 PLEKHA4Q9H4M7 779 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 MIOSQ9NXC5 875 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 ZDHHC7Q9NXF8 308 aa7.84□□□□□ -1.15
COL17A1-205ENST00000480127 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.84□□□□□ -1.15
COL17A1-205ENST00000480127 DMXL1Q9Y485 3027 aa7.84□□□□□ -1.16
COL17A1-205ENST00000480127 DNAH14Q0VDD8 3507 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 FANCMQ8IYD8 2048 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ARL5CA6NH57 179 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 M0R2N6 131 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ZBTB39O15060 712 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 KINO60870 393 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 NPTXRO95502 500 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 OR52Z1P0C646 297 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 CCT6AP40227 531 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 MLH1P40692 756 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 MATR3P43243 847 aaKnown RBP eCLIP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ATXN1P54253 815 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 HMGN5P82970 282 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 SNW1Q13573 536 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ZNF174Q15697 407 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 VARS2Q5ST30 1063 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 PARM1Q6UWI2 310 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 GLYCTKQ8IVS8 523 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 GPR65Q8IYL9 337 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 NSUN7Q8NE18 718 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 GSTCDQ8NEC7 633 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 HAS1Q92839 578 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 FGF14Q92915 247 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 CDK5RAP3Q96JB5 506 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ZSCAN31Q96LW9 406 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 NACC1Q96RE7 527 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 GAD1Q99259 594 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 DDX23Q9BUQ8 820 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 COLEC11Q9BWP8 271 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 EIF2AQ9BY44 585 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 GPR62Q9BZJ7 368 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 C2orf40Q9H1Z8 148 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 DHX33Q9H6R0 707 aaKnown RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ANKEF1Q9NU02 776 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 FNIP2Q9P278 1114 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 MTF2Q9Y483 593 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 HES2Q9Y543 173 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 IPPQ9Y573 584 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 ZFP37Q9Y6Q3 630 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 DOCK8Q8NF50 2099 aa7.83□□□□□ -1.16
COL17A1-205ENST00000480127 KMT2BQ9UMN6 2715 aaPredicted RBP7.83□□□□□ -1.16
COL17A1-205ENST00000480127 CEP250Q9BV73 2442 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 WDR87Q6ZQQ6 2873 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 A0A087WWV3 80 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 KANSL1LA0AUZ9 987 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 H3BQV1 296 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 TADA2AO75478 443 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 ZMYND10O75800 440 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SLITRK3O94933 977 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 LARGE1O95461 756 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CTDNEP1O95476 244 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 RPL17P18621 184 aaKnown RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 FSHRP23945 695 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 SCNN1GP51170 649 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 PTENP60484 403 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 NTHL1P78549 312 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 CREMQ03060 361 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 PRPF4BQ13523 1007 aaKnown RBP7.82□□□□□ -1.16
COL17A1-205ENST00000480127 PPP2R5AQ15172 486 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 NPY5RQ15761 445 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 MAPK6Q16659 721 aa7.82□□□□□ -1.16
COL17A1-205ENST00000480127 EARS2Q5JPH6 523 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms