RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 FZD8Q9H461 694 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 GDPD2Q9HCC8 539 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 SUCLA2Q9P2R7 463 aaPredicted RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.8□□□□□ -0.84
DDX56-211ENST00000479602 FAM186AA6NE01 2351 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 CNTNAP2Q9UHC6 1331 aa9.8□□□□□ -0.84
DDX56-211ENST00000479602 TMEM150BA6NC51 233 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 TMEM221A6NGB7 291 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 MYMKA6NI61 221 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 M0R296 226 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 KINO60870 393 aaKnown RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 LILRB3O75022 631 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 HIP1RO75146 1068 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 TBCAO75347 108 aaKnown RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 RHOBTB3O94955 611 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 EFEMP2O95967 443 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 NPTX2P47972 431 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 SMTNP53814 917 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 TCF15Q12870 199 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 DPYDQ12882 1025 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 MCM6Q14566 821 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 AMHR2Q16671 573 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 FOXD4L6Q3SYB3 417 aaPredicted RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 LONRF3Q496Y0 759 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 FOXD4L3Q6VB84 417 aaPredicted RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 ZPBP2Q6X784 338 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 MRPL10Q7Z7H8 261 aaKnown RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 MAP4K3Q8IVH8 894 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 CCDC65Q8IXS2 484 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 THNSL1Q8IYQ7 743 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 TMEM161BQ8NDZ6 487 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 PRSS33Q8NF86 280 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 MICAL1Q8TDZ2 1067 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 DHX58Q96C10 678 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 PAGE5Q96GU1 130 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 CHAMP1Q96JM3 812 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 PPP1R16BQ96T49 567 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 TCF25Q9BQ70 676 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 POLR3FQ9H1D9 316 aaPredicted RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 ADAM7Q9H2U9 754 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 AGPAT5Q9NUQ2 364 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 PRMT7Q9NVM4 692 aaPredicted RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 SPG21Q9NZD8 308 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 CGNQ9P2M7 1197 aaKnown RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 PUF60Q9UHX1 559 aaKnown RBP9.79□□□□□ -0.84
DDX56-211ENST00000479602 VPS13AQ96RL7 3174 aa9.79□□□□□ -0.84
DDX56-211ENST00000479602 EP300Q09472 2414 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 MYO10Q9HD67 2058 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 KIAA1671Q9BY89 1806 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 KIAA0391O15091 583 aaKnown RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 INPPL1O15357 1258 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 KLRC4O43908 158 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 CLASP2O75122 1294 aaKnown RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 CSDE1O75534 798 aaKnown RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 OFD1O75665 1012 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PAPLNO95428 1278 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PRKCSHP14314 528 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 ZSCAN20P17040 1043 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 HOXA11P31270 313 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 MCM4P33991 863 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PPM1AP35813 382 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PBX3P40426 434 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 MRE11P49959 708 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 RAB27AP51159 221 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 MBTD1Q05BQ5 628 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 SIGLEC14Q08ET2 396 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 HSP90AA2PQ14568 343 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 POSTNQ15063 836 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 NFIL3Q16649 462 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 CT47A1Q5JQC4 288 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 STXBP4Q6ZWJ1 553 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 EPM2AIP1Q7L775 607 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 TMEM173Q86WV6 379 aaPredicted RBP9.78□□□□□ -0.84
DDX56-211ENST00000479602 ZBTB8OSQ8IWT0 167 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 LRRC43Q8N309 656 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PDILTQ8N807 584 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 CNNM3Q8NE01 707 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 ASAP3Q8TDY4 903 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 SLC22A17Q8WUG5 538 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 ZNF558Q96NG5 402 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 VN1R3Q9BXE9 311 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 RMND1Q9NWS8 449 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 AKT3Q9Y243 479 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 STYXL1Q9Y6J8 313 aa9.78□□□□□ -0.84
DDX56-211ENST00000479602 PLXNA4Q9HCM2 1894 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 A0A087WZ62 844 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 A0A1B0GUA9 196 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 CARNS1A5YM72 827 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 MEIS3P2A8K0S8 358 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 ACKR2O00590 384 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 TRAK2O60296 914 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 B4GALT3O60512 393 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 NR1I2O75469 434 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 CSPG5O95196 566 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 KIF20AO95235 890 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 GALTP07902 379 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 SKIP12755 728 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 LIG1P18858 919 aa9.77□□□□□ -0.85
DDX56-211ENST00000479602 FGFR4P22455 802 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms