RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 CCDC155Q8N6L0 562 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 PLEKHO2Q8TD55 490 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CPLX3Q8WVH0 158 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 DEFB118Q96PH6 123 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 LSM14BQ9BX40 385 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 NUCKS1Q9H1E3 243 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 KCNF1Q9H3M0 494 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CDHR5Q9HBB8 845 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 TMEM8AQ9HCN3 771 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 FAM207AQ9NSI2 230 aaPredicted RBP12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 AGPAT5Q9NUQ2 364 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 GCNT4Q9P109 453 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CEP72Q9P209 647 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 FBXL5Q9UKA1 691 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 ZKSCAN5Q9Y2L8 839 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 CDY2AQ9Y6F7 541 aa12.98□□□□□ -0.33
TM9SF4-206ENST00000479591 ARVCFO00192 962 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CLTAP09496 248 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 HSPA1AP0DMV8 641 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 HSPA1BP0DMV9 641 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 PON1P27169 355 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 KRT9P35527 623 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 GCLMP48507 274 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 ADKP55263 362 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 MGAT3Q09327 533 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 ARID5BQ14865 1188 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 TSR1Q2NL82 804 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 SLC27A1Q6PCB7 646 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CPB2Q96IY4 423 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 ZNF830Q96NB3 372 aaPredicted RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CGRRF1Q99675 332 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CRACR2AQ9BSW2 395 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 NAA15Q9BXJ9 866 aaKnown RBP12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 TMEM117Q9H0C3 514 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 TMX1Q9H3N1 280 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 ABHD10Q9NUJ1 306 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 CENPFP49454 3210 aa12.97□□□□□ -0.33
TM9SF4-206ENST00000479591 IL18RAPO95256 599 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 DLATP10515 647 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 SLC9A1P19634 815 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 RFX1P22670 979 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 HOXA11P31270 313 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 THPOP40225 353 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 CCZ1BP86790 482 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 CCZ1P86791 482 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 LRMPQ12912 555 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 EPC2Q52LR7 807 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 ZBTB41Q5SVQ8 909 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 KLHDC7AQ5VTJ3 777 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 TRIM65Q6PJ69 517 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 ZSCAN30Q86W11 494 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 WDR49Q8IV35 697 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 THNSL1Q8IYQ7 743 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 EHBP1Q8NDI1 1231 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 OR8K1Q8NGG5 319 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 TMEM40Q8WWA1 233 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 ARMC5Q96C12 935 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 ZNF333Q96JL9 665 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 DNAJC7Q99615 494 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 BAG1Q99933 345 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 SENP6Q9GZR1 1112 aaPredicted RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 GANQ9H2C0 597 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 RPF1Q9H9Y2 349 aaKnown RBP12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 COQ4Q9Y3A0 265 aa12.96□□□□□ -0.33
TM9SF4-206ENST00000479591 RPS6KA5O75582 802 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 NOL4O94818 638 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 CHRNA1P02708 482 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 STAG3L1P0CL83 205 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 SKILP12757 684 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 CAPN2P17655 700 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 TNNI1P19237 187 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 FGFR4P22455 802 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 FECHP22830 423 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 MSNP26038 577 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 TNFSF9P41273 254 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 GRM5P41594 1212 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 TRIM71Q2Q1W2 868 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 SEZ6Q53EL9 994 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 FAM26DQ5JW98 314 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 C15orf39Q6ZRI6 1047 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 FAM228AQ86W67 206 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 CDR2LQ86X02 465 aaPredicted RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 USP38Q8NB14 1042 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 FBXL13Q8NEE6 735 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 WNT8BQ93098 351 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 CRISPLD2Q9H0B8 497 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 PDE11AQ9HCR9 933 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 TRMT13Q9NUP7 481 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 ZNHIT6Q9NWK9 470 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 MYO6Q9UM54 1294 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 PIN4Q9Y237 131 aaKnown RBP12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 SQORQ9Y6N5 450 aa12.95□□□□□ -0.34
TM9SF4-206ENST00000479591 MROH7Q68CQ1 1323 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms