RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 HOXD11P31277 338 aaPredicted RBP25.17■■□□□ 1.62
C9orf3-216ENST00000478603 HASPINQ8TF76 798 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 KIFAP3Q92845 792 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 ADPGKQ9BRR6 497 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 SMOC2Q9H3U7 446 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 LIMD1Q9UGP4 676 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 WDFY4Q6ZS81 3184 aa25.17■■□□□ 1.62
C9orf3-216ENST00000478603 TUSC3Q13454 348 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 NT5DC1Q5TFE4 455 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 KRT79Q5XKE5 535 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 GLYCTKQ8IVS8 523 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 SUGP1Q8IWZ8 645 aaKnown RBP25.16■■□□□ 1.62
C9orf3-216ENST00000478603 GDAQ9Y2T3 454 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 KIF3AQ9Y496 699 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 STK24Q9Y6E0 443 aa25.16■■□□□ 1.62
C9orf3-216ENST00000478603 LAD1O00515 517 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 TADA2AO75478 443 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 BRD1O95696 1058 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 GLUD1P00367 558 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 SPATA31D3P0C874 917 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 HSP90AA2PQ14568 343 aaPredicted RBP25.15■■□□□ 1.62
C9orf3-216ENST00000478603 USP41Q3LFD5 358 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 IER5LQ5T953 404 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 DTHD1Q6ZMT9 781 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 SPATA31D4Q6ZUB0 917 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 PALB2Q86YC2 1186 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 FBXL6Q8N531 539 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 RIN2Q8WYP3 895 aaPredicted RBP25.15■■□□□ 1.62
C9orf3-216ENST00000478603 MMTAG2Q9BU76 263 aaKnown RBP25.15■■□□□ 1.62
C9orf3-216ENST00000478603 KCNH6Q9H252 994 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 SORCS3Q9UPU3 1222 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 DNM3Q9UQ16 869 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 USTQ9Y2C2 406 aa25.15■■□□□ 1.62
C9orf3-216ENST00000478603 PDGFBP01127 241 aaPredicted RBP25.14■■□□□ 1.62
C9orf3-216ENST00000478603 RPL17P18621 184 aaKnown RBP25.14■■□□□ 1.62
C9orf3-216ENST00000478603 GJB2P29033 226 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 PRPHP41219 470 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 EFNA5P52803 228 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 MTMR3Q13615 1198 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 ATF7IP2Q5U623 682 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 CCDC149Q6ZUS6 474 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 KCNK18Q7Z418 384 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 ZDHHC14Q8IZN3 488 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 RUSC1Q9BVN2 902 aa25.14■■□□□ 1.62
C9orf3-216ENST00000478603 MYH11P35749 1972 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 CCDC195A0A1B0GUA6 201 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 CCDC169A6NNP5 214 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 HIP1RO75146 1068 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 RFPL2O75678 378 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 KIF4AO95239 1232 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 THP07101 528 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 PEX3P56589 373 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 NHLH1Q02575 133 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 ZRSR1Q15695 479 aaKnown RBP25.13■■□□□ 1.61
C9orf3-216ENST00000478603 NAB2Q15742 525 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 PRSS55Q6UWB4 352 aaPredicted RBP25.13■■□□□ 1.61
C9orf3-216ENST00000478603 C15orf39Q6ZRI6 1047 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 DAW1Q8N136 415 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 VWA8A3KMH1 1905 aa25.13■■□□□ 1.61
C9orf3-216ENST00000478603 K7ERI5 159 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 NPTX2P47972 431 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 VCPP55072 806 aaKnown RBP25.12■■□□□ 1.61
C9orf3-216ENST00000478603 DCAF4L1Q3SXM0 396 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 RILPL1Q5EBL4 403 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 RTP2Q5QGT7 225 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 PLCD3Q8N3E9 789 aa25.12■■□□□ 1.61
C9orf3-216ENST00000478603 CMASQ8NFW8 434 aaPredicted RBP25.12■■□□□ 1.61
C9orf3-216ENST00000478603 SF3B1O75533 1304 aaKnown RBP eCLIP25.12■■□□□ 1.613e-6■■■■■ 137.9
C9orf3-216ENST00000478603 H3BQV1 296 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 TGM5O43548 720 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 ATP2C1P98194 919 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-216ENST00000478603 GLRA4Q5JXX5 417 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 RINT1Q6NUQ1 792 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 UBALD2Q8IYN6 164 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 PRSS33Q8NF86 280 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 ACSF2Q96CM8 615 aaPredicted RBP25.11■■□□□ 1.61
C9orf3-216ENST00000478603 UPF2Q9HAU5 1272 aaKnown RBP25.11■■□□□ 1.61
C9orf3-216ENST00000478603 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.11■■□□□ 1.61
C9orf3-216ENST00000478603 FNIP2Q9P278 1114 aa25.11■■□□□ 1.61
C9orf3-216ENST00000478603 DOCK6Q96HP0 2047 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 MAPK7Q13164 816 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 FAM171A1Q5VUB5 890 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 C1orf186Q6ZWK4 172 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 OTOP3Q7RTS5 596 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 TAS1R3Q7RTX0 852 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 ALYREFQ86V81 257 aaKnown RBP25.1■■□□□ 1.61
C9orf3-216ENST00000478603 CEP57Q86XR8 500 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 CEP120Q8N960 986 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 PLIN2Q99541 437 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 DPP7Q9UHL4 492 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 PHLPP2Q6ZVD8 1323 aa25.1■■□□□ 1.61
C9orf3-216ENST00000478603 SFI1A8K8P3 1242 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 IGFBP6P24592 240 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-216ENST00000478603 RAD51AP2Q09MP3 1159 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 DMP1Q13316 513 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-216ENST00000478603 ELMSAN1Q6PJG2 1045 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 GPR65Q8IYL9 337 aa25.09■■□□□ 1.61
C9orf3-216ENST00000478603 SMG7Q92540 1137 aaKnown RBP25.09■■□□□ 1.61
C9orf3-216ENST00000478603 ZNF707Q96C28 371 aaPredicted RBP25.09■■□□□ 1.61
C9orf3-216ENST00000478603 PNMA5Q96PV4 448 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms