RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 PRAMEF14Q5SWL7 426 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 SNX33Q8WV41 574 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 SLC9A6Q92581 669 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 DUSP26Q9BV47 211 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 MTFR1LQ9H019 292 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 GPRC5DQ9NZD1 345 aa4.83□□□□□ -1.64
HPS3-205ENST00000478525 MYADML2A6NDP7 307 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 ADCY6O43306 1168 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
HPS3-205ENST00000478525 MATN4O95460 622 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 IGLV2-14P01704 120 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 ELANEP08246 267 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 CANXP27824 592 aaKnown RBP4.82□□□□□ -1.64
HPS3-205ENST00000478525 NEK4P51957 841 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 KRTAP10-9P60411 292 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 SIM1P81133 766 aaPredicted RBP4.82□□□□□ -1.64
HPS3-205ENST00000478525 TERF2Q15554 542 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 EPHA10Q5JZY3 1008 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 GPR149Q86SP6 731 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 SMC1BQ8NDV3 1235 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 OR56A1Q8NGH5 318 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 ZFP28Q8NHY6 868 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 SLC35B2Q8TB61 432 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 CAGE1Q8TC20 777 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 GPR101Q96P66 508 aaPredicted RBP4.82□□□□□ -1.64
HPS3-205ENST00000478525 DNAJC2Q99543 621 aaKnown RBP4.82□□□□□ -1.64
HPS3-205ENST00000478525 ANO3Q9BYT9 981 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 KIAA1586Q9HCI6 787 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 TMEM260Q9NX78 707 aa4.82□□□□□ -1.64
HPS3-205ENST00000478525 DRGXA6NNA5 263 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 FOSP01100 380 aaPredicted RBP4.81□□□□□ -1.64
HPS3-205ENST00000478525 ITGB6P18564 788 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 POU3F2P20265 443 aaPredicted RBP4.81□□□□□ -1.64
HPS3-205ENST00000478525 CTSSP25774 331 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 LSP1P33241 339 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 MXRA7P84157 204 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 FOXF2Q12947 444 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 ZNF169Q14929 603 aaPredicted RBP4.81□□□□□ -1.64
HPS3-205ENST00000478525 ARMC6Q6NXE6 501 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 HDGFL2Q7Z4V5 671 aaPredicted RBP4.81□□□□□ -1.64
HPS3-205ENST00000478525 OR14C36Q8NHC7 312 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 PHACTR3Q96KR7 559 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 Q96MF0 132 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 WNT8AQ9H1J5 351 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 SPTLC3Q9NUV7 552 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 KLHL11Q9NVR0 708 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 CDY2AQ9Y6F7 541 aa4.81□□□□□ -1.64
HPS3-205ENST00000478525 KDM1AO60341 852 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 C1QL1O75973 258 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 GASTP01350 101 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 FLT3LGP49771 235 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 NHLH1Q02575 133 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 NFE2L2Q16236 605 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 C21orf62-AS1Q17RA5 79 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 ATXN7L2Q5T6C5 722 aaPredicted RBP4.8□□□□□ -1.64
HPS3-205ENST00000478525 B3GNTL1Q67FW5 361 aaPredicted RBP4.8□□□□□ -1.64
HPS3-205ENST00000478525 PDZD4Q76G19 769 aaPredicted RBP4.8□□□□□ -1.64
HPS3-205ENST00000478525 LRRTM3Q86VH5 581 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 MAPKAPK5Q8IW41 473 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 RHOT2Q8IXI1 618 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 ZNF480Q8WV37 535 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 RSAD2Q8WXG1 361 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 ATP11BQ9Y2G3 1177 aa4.8□□□□□ -1.64
HPS3-205ENST00000478525 CXorf49A8MYA2 514 aaPredicted RBP4.79□□□□□ -1.64
HPS3-205ENST00000478525 PJA2O43164 708 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 CRHR1P34998 444 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 PCBP1Q15365 356 aaKnown RBP eCLIP4.79□□□□□ -1.64
HPS3-205ENST00000478525 SEPT7Q16181 437 aaKnown RBP4.79□□□□□ -1.64
HPS3-205ENST00000478525 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
HPS3-205ENST00000478525 Q6ZNX1 250 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 BHLHA9Q7RTU4 235 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 ARHGEF25Q86VW2 580 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 SRRM1Q8IYB3 904 aaKnown RBP4.79□□□□□ -1.64
HPS3-205ENST00000478525 TMEM132CQ8N3T6 1108 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 REPS2Q8NFH8 660 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 ZNF384Q8TF68 577 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 ZSWIM1Q9BR11 485 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 ALOXE3Q9BYJ1 711 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 KCTD10Q9H3F6 313 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 SEMA4GQ9NTN9 838 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 FOXJ2Q9P0K8 574 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 CD2APQ9Y5K6 639 aa4.79□□□□□ -1.64
HPS3-205ENST00000478525 COL3A1P02461 1466 aaPredicted RBP4.78□□□□□ -1.64
HPS3-205ENST00000478525 LRRC3CA6NJW4 275 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 LPLP06858 475 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 ADCYAP1R1P41586 468 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 LSSP48449 732 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 RARRES1P49788 294 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 CLRN1P58418 232 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 OCA2Q04671 838 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 MST1LQ2TV78 715 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 FAM47AQ5JRC9 791 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 CNNM4Q6P4Q7 775 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 FRMD7Q6ZUT3 714 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 FUBP1Q96AE4 644 aaKnown RBP4.78□□□□□ -1.64
HPS3-205ENST00000478525 RNF31Q96EP0 1072 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 RNF7Q9UBF6 113 aa4.78□□□□□ -1.64
HPS3-205ENST00000478525 NOX1Q9Y5S8 564 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms