RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 SPTY2D1Q68D10 685 aaPredicted RBP5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 LILRA3Q8N6C8 439 aaPredicted RBP5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 MAGEB6Q8N7X4 407 aa5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 RIN2Q8WYP3 895 aaPredicted RBP5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 RBM12Q9NTZ6 932 aaKnown RBP5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 AURKAIP1Q9NWT8 199 aaPredicted RBP5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 GPRC5DQ9NZD1 345 aa5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 DNM3Q9UQ16 869 aa5.98□□□□□ -1.45
SMNDC1-205ENST00000477763 CAPN14A8MX76 684 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 MFAP3LO75121 409 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 ITGA10O75578 1167 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 ZRANB2O95218 330 aaKnown RBP eCLIP5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 HSPA6P17066 643 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 ACRV1P26436 265 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 GFOD2Q3B7J2 385 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 METTL24Q5JXM2 366 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 PDZD4Q76G19 769 aaPredicted RBP5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 DOK3Q7L591 496 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 C14orf80Q86SX3 495 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 MDGA1Q8NFP4 955 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 TTC8Q8TAM2 541 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 COA7Q96BR5 231 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 CLIP3Q96DZ5 547 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 AIFM3Q96NN9 605 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 CDC5LQ99459 802 aaKnown RBP5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 BCO1Q9HAY6 547 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 TRPS1Q9UHF7 1281 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 TUBD1Q9UJT1 453 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 MYRFQ9Y2G1 1151 aa5.97□□□□□ -1.45
SMNDC1-205ENST00000477763 KRTAP23-1A1A580 65 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 AKR1B10O60218 316 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 OFD1O75665 1012 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 POU2F2P09086 479 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 GNAT2P19087 354 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 ECHS1P30084 290 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 HIBADHP31937 336 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 WASP42768 502 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 PPP3CAQ08209 521 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 MGAT2Q10469 447 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 IFIT1BQ5T764 474 aaKnown RBP5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 HTR3DQ70Z44 454 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 OR7D4Q8NG98 312 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 ST8SIA2Q92186 375 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 HOXB13Q92826 284 aaPredicted RBP5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 INTUQ9ULD6 942 aa5.96□□□□□ -1.46
SMNDC1-205ENST00000477763 FAM171A2A8MVW0 826 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 DTNBO60941 627 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 STC2O76061 302 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 RPLP2P05387 115 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 APBA1Q02410 837 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 NOMO1Q15155 1222 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 DCAF17Q5H9S7 520 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 NAIF1Q69YI7 327 aaPredicted RBP5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 FAM83AQ86UY5 434 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 PALM2Q8IXS6 379 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 GSPT2Q8IYD1 628 aaKnown RBP5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 NRG4Q8WWG1 115 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 HDAC10Q969S8 669 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 LRGUKQ96M69 825 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 NMRK2Q9NPI5 230 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 CLCA2Q9UQC9 943 aa5.95□□□□□ -1.46
SMNDC1-205ENST00000477763 B5MCH6 92 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 PRPF3O43395 683 aaKnown RBP5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 AP1G1O43747 822 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 ENDOD1O94919 500 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 PDCP20941 246 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 LPOP22079 712 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 RABGGTBP53611 331 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 HLTFQ14527 1009 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 FAM214AQ32MH5 1076 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 SPDYAQ5MJ70 313 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 Q6ZVL8 140 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 MIGA2Q7L4E1 593 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 EPM2AIP1Q7L775 607 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 MAP3K14Q99558 947 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 C7orf25Q9BPX7 421 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 ZNF703Q9H7S9 590 aaPredicted RBP5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 DMRT3Q9NQL9 472 aa5.94□□□□□ -1.46
SMNDC1-205ENST00000477763 CCDC154A6NI56 674 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 GOLGA6L6A8MZA4 724 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 ERC2O15083 957 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 PRC1O43663 620 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 ADSLP30566 484 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 MAN2A2P49641 1150 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 FLT3LGP49771 235 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 ZXDCQ2QGD7 858 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 PRAMEF14Q5SWL7 426 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 PPP4R3AQ6IN85 833 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 RNF207Q6ZRF8 634 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 USP45Q70EL2 814 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 GPRIN1Q7Z2K8 1008 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 ELOA2Q8IYF1 753 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 TRMT2AQ8IZ69 625 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 OR52N2Q8NGI0 321 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 SLC35G2Q8TBE7 412 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 DPF2Q92785 391 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 CYFIP2Q96F07 1278 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 EPC1Q9H2F5 836 aa5.93□□□□□ -1.46
SMNDC1-205ENST00000477763 SERPINB13Q9UIV8 391 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms