RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ZBTB45Q96K62 511 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 FAM193BQ96PV7 902 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 GAD1Q99259 594 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 TTYH1Q9H313 450 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 TYW1Q9NV66 732 aaKnown RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 INPP5FQ9Y2H2 1132 aa14.34□□□□□ -0.11
TOP3A-205ENST00000477508 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.34□□□□□ -0.11
TOP3A-205ENST00000477508 C5orf67F2Z3F1 127 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 PRPF6O94906 941 aaKnown RBP14.33□□□□□ -0.12
TOP3A-205ENST00000477508 LDHAP00338 332 aaKnown RBP14.33□□□□□ -0.12
TOP3A-205ENST00000477508 PRR29P0C7W0 189 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 GARTP22102 1010 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 AKAP5P24588 427 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 CTNNB1P35222 781 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 PPM1AP35813 382 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 MLH1P40692 756 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 ALDH7A1P49419 539 aaKnown RBP14.33□□□□□ -0.12
TOP3A-205ENST00000477508 EPC2Q52LR7 807 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 HS2ST1Q7LGA3 356 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 FBXO22Q8NEZ5 403 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 SPDYE1Q8NFV5 336 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-205ENST00000477508 SPATA20Q8TB22 786 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 SCFD1Q8WVM8 642 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 POMGNT1Q8WZA1 660 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 P2RX5Q93086 422 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 HPS3Q969F9 1004 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 TSPAN18Q96SJ8 248 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
TOP3A-205ENST00000477508 MSTO1Q9BUK6 570 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 GBP3Q9H0R5 595 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 PLEKHA5Q9HAU0 1116 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 SLC39A2Q9NP94 309 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 LMBRD1Q9NUN5 540 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 TBC1D13Q9NVG8 400 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 GDAQ9Y2T3 454 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 RALGAPA2Q2PPJ7 1873 aa14.33□□□□□ -0.12
TOP3A-205ENST00000477508 CHD9Q3L8U1 2897 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 ANKRD63C9JTQ0 380 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 ARHGEF15O94989 841 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 HARSP12081 509 aaKnown RBP14.32□□□□□ -0.12
TOP3A-205ENST00000477508 KCNA1Q09470 495 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 GRIK3Q13003 919 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 STK4Q13043 487 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 PNOCQ13519 176 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 KNOP1Q1ED39 458 aaKnown RBP14.32□□□□□ -0.12
TOP3A-205ENST00000477508 SLC39A4Q6P5W5 647 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 LRRC55Q6ZSA7 311 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 ZNF558Q96NG5 402 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 TMEM175Q9BSA9 504 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 C17orf80Q9BSJ5 609 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 FGFBP2Q9BYJ0 223 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 CWH43Q9H720 699 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 STK39Q9UEW8 545 aa14.32□□□□□ -0.12
TOP3A-205ENST00000477508 AGO2Q9UKV8 859 aaKnown RBP14.32□□□□□ -0.12
TOP3A-205ENST00000477508 H3BNC9 293 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 POMCP01189 267 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 ALDH2P05091 517 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 THP07101 528 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 LINC00271P0C7V0 271 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 UBE3AQ05086 875 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 GRIN2CQ14957 1233 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 XKR4Q5GH76 650 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 KCNT2Q6UVM3 1135 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 CD302Q8IX05 232 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 CEP120Q8N960 986 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 COLGALT1Q8NBJ5 622 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 GLIS3Q8NEA6 775 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 ZFP42Q96MM3 310 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 GAS2L1Q99501 681 aaPredicted RBP14.31□□□□□ -0.12
TOP3A-205ENST00000477508 HAPLN2Q9GZV7 340 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 LMAN2LQ9H0V9 348 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 NRDE2Q9H7Z3 1164 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 RPF1Q9H9Y2 349 aaKnown RBP14.31□□□□□ -0.12
TOP3A-205ENST00000477508 KIAA1586Q9HCI6 787 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 SLC38A7Q9NVC3 462 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 MTMR10Q9NXD2 777 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 KLK14Q9P0G3 267 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 PCDHA5Q9Y5H7 936 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 SZT2Q5T011 3432 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 CITO14578 2027 aa14.31□□□□□ -0.12
TOP3A-205ENST00000477508 NLRC5Q86WI3 1866 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 FAM189A1O60320 539 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 ZC3H11AO75152 810 aaKnown RBP eCLIP14.3□□□□□ -0.12
TOP3A-205ENST00000477508 KCNE1P15382 129 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 ADSSP30520 456 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 HOXD13P35453 343 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 PPP1R2P41236 205 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 SCNN1GP51170 649 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 BCAR1P56945 870 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 OSTNP61366 133 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 KRT17Q04695 432 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 GPM6BQ13491 265 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 PTPROQ16827 1216 aa14.3□□□□□ -0.12
TOP3A-205ENST00000477508 ARMCX5Q6P1M9 558 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms